Gene Sros_6425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6425 
Symbol 
ID8669734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7036581 
End bp7037324 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341882 
Protein GI271967686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00857124 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGTTCA ATCGGGCTGG CTACGATGAG CCCGTGCCAT CCAGAGCGGG CGGGGAGCCC 
GATGTCCCGG TCAGGCGTCG CAGGCGCCCC GAGTACCGCG CGGGGCGCCC GACGCTCACC
GGGGAGGGGA TCGCTAGGGC GGCACTGGAG GTGCTCGCCG GGGGAGGGCC GGCCGAGCTG
ACCATGCGGG CCGTCGCCAC GCGGCTGGAG GTCTCGCCGC GCGCCCTGTA CAACTACGTC
ACCGACCGCC GTCACCTGCT GGAGCTCGTC GTCTCCGTCA GTCAGGCCGA CCGCCCCGCG
CCCCGGCTGG ATCCCGCGCG GTGGCAGGAG AGCCTGCGGG AGCACTGCCG CGATCTGCGC
GCCTGGTATC GCTCCCATCC GGGGCTGCTC GCCCTGGCCC GCGCCGAGGA TCTGACCCCC
TTCGCCTCAC CTGACACCCT GCGCGCCGAC GATGTCGTGG TGGGCTTCTT CCTTGAGGTC
GGGCTGTCCC CGCAGAACGC CTACCGCGCC TGGGCGGTCA CCGTGCTCCA GGTGGCCGGC
TTCGCCGAGA TCTGGGACGC GTGGCACGAC CGGCCGCCTC CCGGCACGGA GCCGGGCGGG
TGGAACGGGC TGCCGCGACC GCTCTCCCCG GACGACGGGC TGCCCAGCCT GCGGAGGGCC
GCGGGCGCGG CCTCGGCCGC GCCGGACGCG CTCTTCGAGT CCGTGCTGGA CATGCTGGTC
GCGGGTGTCG AGGCGATGCG CTGA
 
Protein sequence
MKFNRAGYDE PVPSRAGGEP DVPVRRRRRP EYRAGRPTLT GEGIARAALE VLAGGGPAEL 
TMRAVATRLE VSPRALYNYV TDRRHLLELV VSVSQADRPA PRLDPARWQE SLREHCRDLR
AWYRSHPGLL ALARAEDLTP FASPDTLRAD DVVVGFFLEV GLSPQNAYRA WAVTVLQVAG
FAEIWDAWHD RPPPGTEPGG WNGLPRPLSP DDGLPSLRRA AGAASAAPDA LFESVLDMLV
AGVEAMR