Gene Sros_6414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6414 
Symbol 
ID8669723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7024332 
End bp7024931 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341871 
Protein GI271967675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.275703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0113093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGTG TGACGACTGC CCAGCCCCTC ACCCGCAGTC GCGGGTCACG CCGCACGGAG 
ATCCTGGACG CGGCCGCCGC GCTGTTCGCG GCGCGCGGTT TCCACGGCAC CTCCATCGAG
GACATCGGCG GCGCGGTCGG CACCTCGGGC CCCGCCCTCT ACCGGCACTT CAGCGGCAAG
GAGGCCCTGC TGGCGGAGAT GCTGCTGGAT GTCAGCGAGC GCCTGCACAC CTCGGCGGCC
ACCCGCGTGA CCGAGGCCCC GGACGCCGAG CACGCCCTGG ACGCCCTGCT CACCGGCCAG
ATCGAGTTCG CGCTCAGCCA TCCCGCGCTG ATCACCGTGC ACGACCGCGA GCTCGGCAAC
GTCCCCGAGC CCGCCCGCCG GCAGATCCGC CGCCTGCAGC GGCTCTACGT GGAGGAGTGG
GTCACCGTGC TGAGCGAGCT CTACCCGGGC TGCCCCCCGT CACGCCTGCG CGCCGCGACC
CACGCCGTCT TCGGCCTGCT CAACTCCACC CCGCACAGCG CGGGTGAGCT CGACCCCGAG
GCGATGGCCG GGCTGCTGCG GAGCATGGCC CGCGCGGCGC TCGCCAGGGT CCAGAGTTAG
 
Protein sequence
MRGVTTAQPL TRSRGSRRTE ILDAAAALFA ARGFHGTSIE DIGGAVGTSG PALYRHFSGK 
EALLAEMLLD VSERLHTSAA TRVTEAPDAE HALDALLTGQ IEFALSHPAL ITVHDRELGN
VPEPARRQIR RLQRLYVEEW VTVLSELYPG CPPSRLRAAT HAVFGLLNST PHSAGELDPE
AMAGLLRSMA RAALARVQS