Gene Sros_6398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6398 
Symbol 
ID8669707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7003312 
End bp7004826 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content75% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003341855 
Protein GI271967659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0647051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGTT CCCGCCATGA CGCAGTGATC ATCGGAGGCG GCCACAACGG CCTGGTCGCC 
GCCGCCTACC TCGCCCGCGC GGGCCGCAAG GTCCTCGTCC TGGAACGCCT CGGCCACGTC
GGCGGCCTCG CCGTGTCGGC GCAGGCCTTC CCCGGCGTCG ACGCCCGGCT CTCGCGCTAC
TCCTACCTGG TCAGCCTGCT GCCGGCCAAG GTCGTGGCCG ATCTCGGGAT CAAGGTCGAG
CTGCGCCGCC GCCGGTACGC CTCCTACACC CCCGCCGGGG ACACCGGCCT GCTGGTGGAC
AACGGCGACG CCGCCCGCAC CGCCGCCTCC TTCGCCCGGG TCACCGGAGG CACCGCCGAG
CTGGAGGCGT GGCGGCGCTT CTACGCGATG ACCGCCGACG TCGCCGAACG GGTCGCGCCG
ACCCTGCTGG AACCGCTCAT GGACCGTGCG GCGATGCGGG ACCTCGTCGG CCGGCAGGCG
TGGCGGGAGC TGTTCGAACG GCCGATCGGC GAGGTCGTGG ACGAGCGGTT CGCCGACGAC
ACCGTGCGGG GCGTGGTGCT CACCGACGCC CTGATCGGCA CCTTCGCCGA CCCGTGCGAC
CAGGGCCTGC TGGCCAACCG CTGCCTGCTC TACCACGTGA TCGGGGACGG GACCGGTGAC
TGGAACGTCC CTGTCGGCGG CATGGGCGCG GTCTCCGGAG CCCTGGCCGG CGCCGCGCGC
GCGGCCGGCG CCGAGATCCT GACCGGCGCC GAGGTCGTCG CCGTCGACCC GTCGGGCGAG
GTCACCTTCC GCGACGCGGA CGGGGAGCAC ACGGTCCGGG GCGAGCGGAT CCTGGCCAAC
GTGCCGCCCG CCGTGCTCGC CCGCCTGCTG GGGGCCGGCG AGCCGACACC CGAGGGCGCC
CAGCTCAAGG TGAACATGGT GCTGTCCAGG CTGCCCCGGC TCAGGGATCC CGACGTGGAC
CCGGTGGCGG CCTTCAGCGG CACGTTCCAC ATCAACGAGG GCCGCGACCA GCTCGCCCGC
GCCTACGCGG AGGCGGCGGC CGGGCGGATC CCGGAGCTGC CCCCGGCCGA GGTCTACTGC
CACTCCCTCA CCGACCCCTC CATCCTCGGC CCGGGCCTGC GCGCCGCCGG AGCCCAGACG
ATGACCCTGT TCGGCCTCCA CATGCCCGCC CGGCTGTTCC GCGAGGATCC GGCCGGGGCA
CGCGAGGCCG CGCTGAGGGC CACGCTGGCC TCGATCGACC GGGTGCTCGC CGAGCCGATC
GAGGACTGCC TGCTGCGCGC CCCCGACGGA CGCCCCTGCC TGGAGGCCAA GACGCCGGTC
GACCTGGAGA ACGAGGCGGG CCTGCCCGGC GGCCACATCT TCCACCGCGA CCTGTCCTGG
CCGTTCGGCG AGCCGGGCAA GTGGGGCGTG GAGACCGCCT TCGAGCGCAT CCTGCTCTGC
GGCGCGGGCG CCCGGCGGGG CGGCGGCGTC AGCGGCATCC CCGGCCACAA CGCCGCGATG
GCACTGCTGG CCTGA
 
Protein sequence
MSRSRHDAVI IGGGHNGLVA AAYLARAGRK VLVLERLGHV GGLAVSAQAF PGVDARLSRY 
SYLVSLLPAK VVADLGIKVE LRRRRYASYT PAGDTGLLVD NGDAARTAAS FARVTGGTAE
LEAWRRFYAM TADVAERVAP TLLEPLMDRA AMRDLVGRQA WRELFERPIG EVVDERFADD
TVRGVVLTDA LIGTFADPCD QGLLANRCLL YHVIGDGTGD WNVPVGGMGA VSGALAGAAR
AAGAEILTGA EVVAVDPSGE VTFRDADGEH TVRGERILAN VPPAVLARLL GAGEPTPEGA
QLKVNMVLSR LPRLRDPDVD PVAAFSGTFH INEGRDQLAR AYAEAAAGRI PELPPAEVYC
HSLTDPSILG PGLRAAGAQT MTLFGLHMPA RLFREDPAGA REAALRATLA SIDRVLAEPI
EDCLLRAPDG RPCLEAKTPV DLENEAGLPG GHIFHRDLSW PFGEPGKWGV ETAFERILLC
GAGARRGGGV SGIPGHNAAM ALLA