Gene Sros_6384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6384 
Symbol 
ID8669693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6990859 
End bp6991533 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341844 
Protein GI271967648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.317451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.404992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA AAAAGCCGCG GACAGCGCGG CGCGGGGACG CGCTGTCGAA GGAACGCATC 
GTCCGTGCCG CGGTCGAGAC CCTCGATGAG GGCGGGGAGG ACGCGCTGAC CTTCCGGGTG
CTGGCGAATC GTCTGTCGAC CGGGCCTGGA GCGATCTACC ACCACGTCGC CGGCAAGGAC
GAGCTCCTGC GCGCCGCCAC CGACGAGGTC ATCGCTCACG TGACGACCGG AGCGGTCACC
GGTGACGAGC CAGGTGAGGC GATCCGCGCC ATCATGCTCG GCGTGTTCGA TGCGATCCAC
GCCCGCCCGT GGGTCGGTGC GCAGCTGTCT CGCGAACCGT GGCAGACGGC GATGCTGCAG
ATCTTCGAGA GCGCGGGCGG TCAGCTCGCA GCCCTCGGCG TTCCCGAACA CGCGCAGTTC
GACGCCGCCT CCGCGCTCGT GAACTACGTT CTCGGCATCG CAGGACAGTC CGCTGCAGGC
GCCCGCGCCC TGCCACGAGA GACGGACCAG TCCGCGTTCC TTGAAACCAT CGCCGCTCAG
TGGACGACAC AGCACGACGC CGCGAAGTAT CCGTTCGTGC ATCAGGTCGT GGCACAGCTG
GCCGAGCACG ACGACCGCAA GCAATTCCTC GCAGGCATCG ACCTTATCCT CGCCGGGATC
TCGACCATCC GTTAG
 
Protein sequence
MTTKKPRTAR RGDALSKERI VRAAVETLDE GGEDALTFRV LANRLSTGPG AIYHHVAGKD 
ELLRAATDEV IAHVTTGAVT GDEPGEAIRA IMLGVFDAIH ARPWVGAQLS REPWQTAMLQ
IFESAGGQLA ALGVPEHAQF DAASALVNYV LGIAGQSAAG ARALPRETDQ SAFLETIAAQ
WTTQHDAAKY PFVHQVVAQL AEHDDRKQFL AGIDLILAGI STIR