Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6360 |
Symbol | |
ID | 8669669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6969785 |
End bp | 6971644 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003341824 |
Protein GI | 271967628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00827876 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA TCGCCAACTG CTCCGGCTTC TACGGCGACC GGCTGTCGGC CGCCCGGGAG ATGGTCGAGG GCGGTCCGAT CGACGTGCTC ACCGGCGACT GGCTCGCCGA GCTGACCATG CTGATCCTGG CCGGCAACCG GCTGAAGGGC CGTCCCGGCT ACGCGCCGAC CTTCCTGCGG CAGCTTGAGC AGGTCCTGGG GACGTGCCTG GACCGGGGCA TCAGGATCGT GTCCAACGCG GGCGGCCTGG ATCCCGCGGG GTGCGCCGGC GCGGTGACCG AGCTGGCCGG CCGCCTCGGG CTGCCGGTGA AGGTCGCGCA CGTCACCGGG GACGACCTGT CCGGGCACGA CCTGGGCGGC GCGCCGAACC TGGACACCGG GGAGCGGCTG CCCGCCGCCC CGCTGACCGC CAACGCCTAC CTGGGGGGCC GGCCGATCGC CGCCGCGCTG TCCGCCGGGG CGGATGTGGT GGTGACCGGC CGGGTCACGG ACGCCGCGCT GGTCACCGGG CCGGGGATCT GGCGGTACGG CTGGCGGCCC GGCGACCACG ACGCGCTGGC CGGGTCGGTG GTGGCCGGGC ACGTCATCGA GTGCGGCTGC CAGGCGACCG GCGGGAACTA CGCGTTCTTC GGCGAGGTGC CCGACCTGGC GCACTGCGGG TTCCCGCTGG TGGAGCTGGA GTCCGACGGA TCGAGTGTGG TCACCAAGCA TCCCGGGACC GGAGGGCTCG TCTCGGTGGG CACGGTCACG GCGCAGCTGC TGTACGAGAT CGCCTCACCG CGTTACCCGG GCCCCGACGT GGTGGCGCGG TTCGACACGA TCCGCCTGGA GCAGCAGGGC CCGGACCGGG TCCGGATCTC GGGGGTTCGC GGCGAGGCCC CGCCGGACAC GCTCAAGGTC GCGATCAACT ACGTCGGCGG TTACCGCAAC ACCATGACCA TGGTCCTGAC CGGTCTGGAG ATCGAGGCCA AGGCCCGGCT GGCGCAGGAG GCCATCTGGT CCCGCGTCCC CAGGGAGTCC TTCGACCGGG TCGACGTCGA GCTGACCCCC CTGGCCGCCA CCGCCCCGCC GCCTGACGCC GCGCCGGCCA CCGGCACCGC CCTGCTCCGC GTCACCGTGA TGGACGCCGA CCGGAAGAAG GCGGGACGCG CCTTCTCCTC CGCCGTGGTG GAGACGGGGC TGGCCAGCTA TCCCGGCTTC TACGGCCTCA CCCCGCCCGG CGACGCCTCC CCCTATGGCG TCTACTGGCC CACCCTCGTC CCGGCGGAGA CCGTCCGGGC GCGCGTCTGG CTCGACGGCC GTGAGCTCGA CGGCCCGGAA GCCGCCGGCC CGGAGCCCGG GGAGCGCGAG CCCGGCGGCC TGAAGCCCGG CGGGGGGACG CCCGGGGAGC GGGCACCCGA CGGCGGCGAT CCTGACGGCG GAGCGCACCC GGCCTCCCTG GCGGCTTCCG CCACGTCACC GCCCCCGGTG CAGGCGCCGG AGCGGCCGGG GGCGGGCCCG ACCGGCCTGG AGCCCGAGGC CGGTGAGCGG ACCGTGCGGA CCGCGCTGGG CGCGATCATG GGCGCCCGCT CCGGGGACAA GGGCGGGAAC GCCAACCTGG GCGTCTGGGT CCGCACGGCC GAGCAGTTCG CGTGGCTGTC GGGCCACCTG ACGGCCGAGC GGCTCAGGGA ACTCCTCCCG GCCACGGCCG GCCTGGAGAT CGACCGCTTC GACCTCCCCA ACCTCCACGC GCTCAACTTC GTCGTCCACG GCCTCCTCGG GCGGGGGGTG GCCGCCAGCC CCCGCCTCGA CGCCCAGGCC AAGGCCCTCG GCGAGGAGCT CCGCGCCAGG CACGCGGACA TCCCCCGCTC CCTGCTGTGA
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Protein sequence | MLRIANCSGF YGDRLSAARE MVEGGPIDVL TGDWLAELTM LILAGNRLKG RPGYAPTFLR QLEQVLGTCL DRGIRIVSNA GGLDPAGCAG AVTELAGRLG LPVKVAHVTG DDLSGHDLGG APNLDTGERL PAAPLTANAY LGGRPIAAAL SAGADVVVTG RVTDAALVTG PGIWRYGWRP GDHDALAGSV VAGHVIECGC QATGGNYAFF GEVPDLAHCG FPLVELESDG SSVVTKHPGT GGLVSVGTVT AQLLYEIASP RYPGPDVVAR FDTIRLEQQG PDRVRISGVR GEAPPDTLKV AINYVGGYRN TMTMVLTGLE IEAKARLAQE AIWSRVPRES FDRVDVELTP LAATAPPPDA APATGTALLR VTVMDADRKK AGRAFSSAVV ETGLASYPGF YGLTPPGDAS PYGVYWPTLV PAETVRARVW LDGRELDGPE AAGPEPGERE PGGLKPGGGT PGERAPDGGD PDGGAHPASL AASATSPPPV QAPERPGAGP TGLEPEAGER TVRTALGAIM GARSGDKGGN ANLGVWVRTA EQFAWLSGHL TAERLRELLP ATAGLEIDRF DLPNLHALNF VVHGLLGRGV AASPRLDAQA KALGEELRAR HADIPRSLL
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