Gene Sros_6360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6360 
Symbol 
ID8669669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6969785 
End bp6971644 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341824 
Protein GI271967628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00827876 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA TCGCCAACTG CTCCGGCTTC TACGGCGACC GGCTGTCGGC CGCCCGGGAG 
ATGGTCGAGG GCGGTCCGAT CGACGTGCTC ACCGGCGACT GGCTCGCCGA GCTGACCATG
CTGATCCTGG CCGGCAACCG GCTGAAGGGC CGTCCCGGCT ACGCGCCGAC CTTCCTGCGG
CAGCTTGAGC AGGTCCTGGG GACGTGCCTG GACCGGGGCA TCAGGATCGT GTCCAACGCG
GGCGGCCTGG ATCCCGCGGG GTGCGCCGGC GCGGTGACCG AGCTGGCCGG CCGCCTCGGG
CTGCCGGTGA AGGTCGCGCA CGTCACCGGG GACGACCTGT CCGGGCACGA CCTGGGCGGC
GCGCCGAACC TGGACACCGG GGAGCGGCTG CCCGCCGCCC CGCTGACCGC CAACGCCTAC
CTGGGGGGCC GGCCGATCGC CGCCGCGCTG TCCGCCGGGG CGGATGTGGT GGTGACCGGC
CGGGTCACGG ACGCCGCGCT GGTCACCGGG CCGGGGATCT GGCGGTACGG CTGGCGGCCC
GGCGACCACG ACGCGCTGGC CGGGTCGGTG GTGGCCGGGC ACGTCATCGA GTGCGGCTGC
CAGGCGACCG GCGGGAACTA CGCGTTCTTC GGCGAGGTGC CCGACCTGGC GCACTGCGGG
TTCCCGCTGG TGGAGCTGGA GTCCGACGGA TCGAGTGTGG TCACCAAGCA TCCCGGGACC
GGAGGGCTCG TCTCGGTGGG CACGGTCACG GCGCAGCTGC TGTACGAGAT CGCCTCACCG
CGTTACCCGG GCCCCGACGT GGTGGCGCGG TTCGACACGA TCCGCCTGGA GCAGCAGGGC
CCGGACCGGG TCCGGATCTC GGGGGTTCGC GGCGAGGCCC CGCCGGACAC GCTCAAGGTC
GCGATCAACT ACGTCGGCGG TTACCGCAAC ACCATGACCA TGGTCCTGAC CGGTCTGGAG
ATCGAGGCCA AGGCCCGGCT GGCGCAGGAG GCCATCTGGT CCCGCGTCCC CAGGGAGTCC
TTCGACCGGG TCGACGTCGA GCTGACCCCC CTGGCCGCCA CCGCCCCGCC GCCTGACGCC
GCGCCGGCCA CCGGCACCGC CCTGCTCCGC GTCACCGTGA TGGACGCCGA CCGGAAGAAG
GCGGGACGCG CCTTCTCCTC CGCCGTGGTG GAGACGGGGC TGGCCAGCTA TCCCGGCTTC
TACGGCCTCA CCCCGCCCGG CGACGCCTCC CCCTATGGCG TCTACTGGCC CACCCTCGTC
CCGGCGGAGA CCGTCCGGGC GCGCGTCTGG CTCGACGGCC GTGAGCTCGA CGGCCCGGAA
GCCGCCGGCC CGGAGCCCGG GGAGCGCGAG CCCGGCGGCC TGAAGCCCGG CGGGGGGACG
CCCGGGGAGC GGGCACCCGA CGGCGGCGAT CCTGACGGCG GAGCGCACCC GGCCTCCCTG
GCGGCTTCCG CCACGTCACC GCCCCCGGTG CAGGCGCCGG AGCGGCCGGG GGCGGGCCCG
ACCGGCCTGG AGCCCGAGGC CGGTGAGCGG ACCGTGCGGA CCGCGCTGGG CGCGATCATG
GGCGCCCGCT CCGGGGACAA GGGCGGGAAC GCCAACCTGG GCGTCTGGGT CCGCACGGCC
GAGCAGTTCG CGTGGCTGTC GGGCCACCTG ACGGCCGAGC GGCTCAGGGA ACTCCTCCCG
GCCACGGCCG GCCTGGAGAT CGACCGCTTC GACCTCCCCA ACCTCCACGC GCTCAACTTC
GTCGTCCACG GCCTCCTCGG GCGGGGGGTG GCCGCCAGCC CCCGCCTCGA CGCCCAGGCC
AAGGCCCTCG GCGAGGAGCT CCGCGCCAGG CACGCGGACA TCCCCCGCTC CCTGCTGTGA
 
Protein sequence
MLRIANCSGF YGDRLSAARE MVEGGPIDVL TGDWLAELTM LILAGNRLKG RPGYAPTFLR 
QLEQVLGTCL DRGIRIVSNA GGLDPAGCAG AVTELAGRLG LPVKVAHVTG DDLSGHDLGG
APNLDTGERL PAAPLTANAY LGGRPIAAAL SAGADVVVTG RVTDAALVTG PGIWRYGWRP
GDHDALAGSV VAGHVIECGC QATGGNYAFF GEVPDLAHCG FPLVELESDG SSVVTKHPGT
GGLVSVGTVT AQLLYEIASP RYPGPDVVAR FDTIRLEQQG PDRVRISGVR GEAPPDTLKV
AINYVGGYRN TMTMVLTGLE IEAKARLAQE AIWSRVPRES FDRVDVELTP LAATAPPPDA
APATGTALLR VTVMDADRKK AGRAFSSAVV ETGLASYPGF YGLTPPGDAS PYGVYWPTLV
PAETVRARVW LDGRELDGPE AAGPEPGERE PGGLKPGGGT PGERAPDGGD PDGGAHPASL
AASATSPPPV QAPERPGAGP TGLEPEAGER TVRTALGAIM GARSGDKGGN ANLGVWVRTA
EQFAWLSGHL TAERLRELLP ATAGLEIDRF DLPNLHALNF VVHGLLGRGV AASPRLDAQA
KALGEELRAR HADIPRSLL