Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6338 |
Symbol | |
ID | 8669647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6946099 |
End bp | 6946794 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative transcriptional activator, TenA family |
Protein accession | YP_003341802 |
Protein GI | 271967606 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000818429 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCTGG TCCCCTACGA CGAGTGGCGC GCGAGCGCCG TCGACCCCGC GTTCAGCGAG TGGCTGCGCT CGCTGAGCGA GCCGGAGTGG ACCGCGGTCG TGAACCATCC GTTCGCCGCC TCGATCACCC GGGGCGACGT CGCCGACGAC GACATGCGCC GCTACCTGAT CCAGGACTTC CAGTTCGTCG ACTCCTTCAC CGCGCTGCTC GGCGCGGCCG TGGCCAGCGC GGACAACTTC GAGTCGCGGG TGCCGTTCGG CCGCTTCCTC GGCGAGACCG CCACGACCGA GGAGAAGACC TACTTCCACC GCGCGCTGGC CGCCCTCGGC GCCACCCCGG CGGACCTGGC CTCCCCGCCG CTGGAGCCGG TGACGGCCGA CTTCCGCGCC CTGATGGACG AGGCCAGGAC CAGCCTGGAC TATCCGCTCG TCCTGGCGGT GCTGTCGGTC GCGGAGTGGA GCTATCTCGG CTGGGCGAGC CTGGCCGGGG AGCCGTCGCC GGACAACTTC GTCCACCGCG AGTGGATCGA GTTGCACGAG GGGCCGGTGT TCCGGGCGTG GGTGGGGTTC CTCCGAGGTG AGCTCGACCG CCTCGGCCCC GGGCTCACCT CGGAGGGGCA GCTCCGCGTG CTCGACTTCT TCCGCCGCGC CGTACGGCTG GAGCTGCGCT TCTTCGACAT GGCCGCGGGC GCCTAG
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Protein sequence | MDLVPYDEWR ASAVDPAFSE WLRSLSEPEW TAVVNHPFAA SITRGDVADD DMRRYLIQDF QFVDSFTALL GAAVASADNF ESRVPFGRFL GETATTEEKT YFHRALAALG ATPADLASPP LEPVTADFRA LMDEARTSLD YPLVLAVLSV AEWSYLGWAS LAGEPSPDNF VHREWIELHE GPVFRAWVGF LRGELDRLGP GLTSEGQLRV LDFFRRAVRL ELRFFDMAAG A
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