Gene Sros_6338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6338 
Symbol 
ID8669647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6946099 
End bp6946794 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional activator, TenA family 
Protein accessionYP_003341802 
Protein GI271967606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000818429 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTGG TCCCCTACGA CGAGTGGCGC GCGAGCGCCG TCGACCCCGC GTTCAGCGAG 
TGGCTGCGCT CGCTGAGCGA GCCGGAGTGG ACCGCGGTCG TGAACCATCC GTTCGCCGCC
TCGATCACCC GGGGCGACGT CGCCGACGAC GACATGCGCC GCTACCTGAT CCAGGACTTC
CAGTTCGTCG ACTCCTTCAC CGCGCTGCTC GGCGCGGCCG TGGCCAGCGC GGACAACTTC
GAGTCGCGGG TGCCGTTCGG CCGCTTCCTC GGCGAGACCG CCACGACCGA GGAGAAGACC
TACTTCCACC GCGCGCTGGC CGCCCTCGGC GCCACCCCGG CGGACCTGGC CTCCCCGCCG
CTGGAGCCGG TGACGGCCGA CTTCCGCGCC CTGATGGACG AGGCCAGGAC CAGCCTGGAC
TATCCGCTCG TCCTGGCGGT GCTGTCGGTC GCGGAGTGGA GCTATCTCGG CTGGGCGAGC
CTGGCCGGGG AGCCGTCGCC GGACAACTTC GTCCACCGCG AGTGGATCGA GTTGCACGAG
GGGCCGGTGT TCCGGGCGTG GGTGGGGTTC CTCCGAGGTG AGCTCGACCG CCTCGGCCCC
GGGCTCACCT CGGAGGGGCA GCTCCGCGTG CTCGACTTCT TCCGCCGCGC CGTACGGCTG
GAGCTGCGCT TCTTCGACAT GGCCGCGGGC GCCTAG
 
Protein sequence
MDLVPYDEWR ASAVDPAFSE WLRSLSEPEW TAVVNHPFAA SITRGDVADD DMRRYLIQDF 
QFVDSFTALL GAAVASADNF ESRVPFGRFL GETATTEEKT YFHRALAALG ATPADLASPP
LEPVTADFRA LMDEARTSLD YPLVLAVLSV AEWSYLGWAS LAGEPSPDNF VHREWIELHE
GPVFRAWVGF LRGELDRLGP GLTSEGQLRV LDFFRRAVRL ELRFFDMAAG A