Gene Sros_6329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6329 
Symbol 
ID8669638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6937545 
End bp6938768 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003341793 
Protein GI271967597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.523133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACT CAGACCCGGC GGGTGAAAGC GCGGGGACAC ATGTGCGTCG TGCCCGTAAG 
CGCGCGGGCA TCACCCAGCG AGAGCTGGCC CAGCGTGTCG GCCGAGCGCA GTCATGGGTG
TCCGGGGTCG AGAACGACAG CATCCCGCTT GACTCCATCG CACTGGTCAA CGGCCTTGCC
CGCGTCCTGC GCATACATCC CAACGAGCTC ACCGCACGCC CCTACCGGGG CGACACCCCC
GCAGAAGACC GAGGGCATTC GGCGATCCCC GAGATCCGCC GTCACCTGGA GCGCTACGAC
CTCGACCCCG AATGGGGCGG CGAGGTGAGG TCGCTACCCG AGCTTCGCGC CGGGACCGAG
CGCGCAAGCT GGCTGCGCCT GGAGGCGCGC TACGCGGAAC TCGCCGAAGA ACTCCCCGCT
CTGCTCTCTG AGCTCCAGGC GGCGACCCAC CTCTCCCCTG AGCCTGATCG GAGCGCGGCG
TTCAGCCTGC TTTCCCTGGC CTATCAGGCG GCACACTCAG TGGCCTGCAA TCTCGGTTAC
GCCGATCTTT CCCTGATCGC CGCGGATCGA GCTCGTTGGG CGGCGGAGTG CTCGGGAGAC
CCCTACCACG AAGCGGTGTT CGCCTGTATC CGAGTACGGA ACCTGTGGTC CAGCACCTCG
TGGAACGACG CGCTCACTGT CCTTGACTCG GCGTGCGCGC ATATCGAAGA TCGATATATC
GCCGGTCAAC CGAAGGCGCT GGCTGTTTGG GGTGGGCTCC AGTTACGGGC CGCGATCACT
GCCGCACGGA AGAACGACGC CGCAGAGGCA TGGTCGCGAC ACCGACTCGC GGCCGAGGCC
GTCGCCAGGC TCGGACCTCG CCAGCGCACC AACTACTACG ATCTATCTAC CAACCAGCCC
AACATTGATA TTCACGGCGT CGCCATCGCT GTCGAACTCG GTGACGGGCC GCAGGCCGTA
CGCCGAGGAG AAACCGTCCG GCTTCCGAAG GGTCTGCAAG CCGGTCGCGT CGGACATCAC
CACCTTGATC ACGCCCGGGG CTTGCTGTGG TGTGGCAAGC GAGAGGCCGC GCTGGCTGAG
CTGGAGTGTG CCGAAAAGAT CGCCCCTCTG CTCATCCGTA ACCACCCGAT GGCCCAACAG
GCTGTACGGA CGCTTCTCGA TCTCGAACGC TACAGCTACC GGGAACGCAT CCGTCGTCTG
GGCGTTCGTA TGCACATTCT CTGA
 
Protein sequence
MAYSDPAGES AGTHVRRARK RAGITQRELA QRVGRAQSWV SGVENDSIPL DSIALVNGLA 
RVLRIHPNEL TARPYRGDTP AEDRGHSAIP EIRRHLERYD LDPEWGGEVR SLPELRAGTE
RASWLRLEAR YAELAEELPA LLSELQAATH LSPEPDRSAA FSLLSLAYQA AHSVACNLGY
ADLSLIAADR ARWAAECSGD PYHEAVFACI RVRNLWSSTS WNDALTVLDS ACAHIEDRYI
AGQPKALAVW GGLQLRAAIT AARKNDAAEA WSRHRLAAEA VARLGPRQRT NYYDLSTNQP
NIDIHGVAIA VELGDGPQAV RRGETVRLPK GLQAGRVGHH HLDHARGLLW CGKREAALAE
LECAEKIAPL LIRNHPMAQQ AVRTLLDLER YSYRERIRRL GVRMHIL