| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6317 |
|---|
| Symbol | |
|---|
| ID | 8669626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6926695 |
|---|
| End bp | 6928098 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | soluble pyridine nucleotide transhydrogenase |
|---|
| Protein accession | YP_003341784 |
|---|
| Protein GI | 271967588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0419159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.418244 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGACT TCGATGTTCT CGTCCTGGGT TCCGGGCCGG GCGGGCAGAA GGCGGCGATC
GCCGCGGCGA AACTCGGCAA GCGGGTCGCG GTGGTGGAGA AGAAACACAT GCTCGGGGGC
GTGTGCATCA ACACCGGGAC GATCCCGTCG AAGACGCTTC GGGAGGCGGT CCTCTATCTG
ACGGGGCTCA ATCAGCGGGA GCTGTACGGA GCGAGTTACC GGGTGAAGGA CGAGATCACG
GTCGCGGATC TCGGGATGCG GACGCAGCAT GTGATCGGCC GGGAGATCCA GGTGATCCGG
AGCCAGCTGG GCCGCAACCA TGTGACCGTC TTACAGGGGA CCGGACGGTT CCTGGACGCT
CACACCATCG GGGTCACCGG GGACGAGGAG AGGAAGGTCA CGGCGGAGAA GGTCGTGATC
GCCACGGGGA CGTCGCCGGC CCGTCCGTCC AGCGTGGAGT TCGACGACAA GATGGTCATC
GACTCGGACG CGATCTTGCA TCTCGACCGG GTGCCCGAGA CCCTCGTCGT CGTCGGAGCC
GGGGTCATCG GCATCGAGTA CGCCTCGATG TTCGCAGCGC TCGGCACCAA GGTGACCGTG
GTGGAGCGTC GTGAGCGGAT GCTGGAGTTC TGCGACCTGG AGATCGTGGA GGCGCTCAAA
TACCACCTGC GGGACCTGGC CGTGACGTTC CGGTTCGGTG AGAGCGTCGC CGCGGTCGAG
CGACGGCCCC GCGGGGCCCT GACCGTCCTG GAGAGCGGCA AGAAGATTCC CGCCGACTGC
GTCATGTACT CGGCGGGCCG GCAGGGGAAG ACGGCCGAGC TCTGCCTGGC GGCGGCCGGG
CTCGCCGCCG ACGACCGGGG GCGGATCGAG GTGGACGAGA ACTACGCCAC ACCCGTCCCG
CACATCTACG CGGTCGGTGA CGTGATCGGC TTCCCGGCGC TGGCGGCCAC CTCGATGGAG
CAGGGCCGGC TGGCCGCTCA GCACGCGTGC GGCGAACCGG TCACGGAGAT GCACGAGCTG
TCGCCGATCG GGATCTACAC CATCCCGGAG ATCAGCTTCG TCGGGAAGAC GGAGGACGAG
CTGACCCGTG ACAAGATCCC GTTCGAGGTG GGTATCTCGC GCTACCGCGA GCTGGCCAGG
GGGCAGATCA TCGGTGACTC GTACGGGATG CTCAAGCTGC TCGTCTCCTC CGAGGACCGG
CGCCTGCTCG GCGTCCACGT GTTCGGCACG GGGGCCACCG AGCTCGTCCA CATCGGACAG
ACCGTCATGG GGTGCGGCGG GACGGTCGAC TACCTGGTCA ACGCCGTGTT CAACTACCCG
ACGCTGGCGG AGTCGTACAA GGTCGCCGCC CTGGACGCCA TGAACAAGAT GCGGGTGATC
GCCCGGCTGA CGGCCGAACT GTGA
|
|---|
| Protein sequence | MWDFDVLVLG SGPGGQKAAI AAAKLGKRVA VVEKKHMLGG VCINTGTIPS KTLREAVLYL
TGLNQRELYG ASYRVKDEIT VADLGMRTQH VIGREIQVIR SQLGRNHVTV LQGTGRFLDA
HTIGVTGDEE RKVTAEKVVI ATGTSPARPS SVEFDDKMVI DSDAILHLDR VPETLVVVGA
GVIGIEYASM FAALGTKVTV VERRERMLEF CDLEIVEALK YHLRDLAVTF RFGESVAAVE
RRPRGALTVL ESGKKIPADC VMYSAGRQGK TAELCLAAAG LAADDRGRIE VDENYATPVP
HIYAVGDVIG FPALAATSME QGRLAAQHAC GEPVTEMHEL SPIGIYTIPE ISFVGKTEDE
LTRDKIPFEV GISRYRELAR GQIIGDSYGM LKLLVSSEDR RLLGVHVFGT GATELVHIGQ
TVMGCGGTVD YLVNAVFNYP TLAESYKVAA LDAMNKMRVI ARLTAEL
|
|---|
| |