Gene Sros_6305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6305 
Symbol 
ID8669614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6914270 
End bp6915367 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content72% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003341773 
Protein GI271967577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.177267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.142428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCTG TCGCCTTGGT GTCGGTGGTC GTTGCTGTCG CGGTGGCCGC GACCGGGTTG 
TTCCGGTCCC GGCTCAGGCC GCGTCTGTCC GCGCCGGCCT TGCCGGCCGC GGGCGTGTCC
CTGGCCGTCA CACTCGCCTA CCTCAGTGGT GCGGCGCGGC CCACGCCCGG CGTCGACGCG
CTGGGAATGA TCGAGAGTGT GGCGCTGATG GTGTCGGCCG GCCTGGTCAT CCGGTACGCA
CCCCTCCGGC AGGCGGTGCT CTCGACGTCG GCGGCGGGTC TGGCCGCTGC CGTCTGGCCG
CTGCGCGTCT TCACGCCCGC CTCGCCGCTG GAGGCGATCG GCGTGAGCGC GTTCTGGGGG
CTGGGAGCGT TGCTGGCCAC CGCCATGGGC GCCTACCTGC GGTTTCTCGA TGTACGGCAG
GAGCGCGCGG TGGCCGACAC GCGCACCGCC CTGCGACTGC GGCTGGCCAG GGACCTGCAC
GACTTCCTCG CCCACGACAT CAGCGAGATG GTGGCGCACG CCCAGGCGGG CAGGGTCGCG
GGCGATCCGC TTCAGGCGCT CGAACGCATC GAAAACGCGG GCCAGCGGGC CCTGTCCACG
CTGGACGGCA CCCTGGACAC GCTCCACCAC GATCGGCCCC TCAGCCCCGC CGGTGACCTG
GGCGGCATAA GCGAGGCGGC CGAGCGATTC TCCGCCGCCG GCTCCGCGCA GGTCCGCCTG
CGTATGGATC CGGCCGTGAC GGTTCCGGTG GAGACCGCGG CACTGGCCTA TCGGATCGTG
ATCGAAGGAC TGACCAACAT CCGGCGGCAT GCTCCGCAGG CCACGCGCGT CGACCTGCGG
GTCAGCGCCT CCGCCGGCGT CCTGGAGATC ACGATGACCA ACGACGGTGT GACCCGCATG
CGGAGCCGCC GGCGTGGCGG GTCCGGCCTG CCCGGCCTGG CCGGACTCGT GGAGGATCGG
GGCGGCGAGC TGGTCGCGCG GGCCGTACCG GACGGGTGGT CGCTGACGGC ACGCCTGCCC
CTGGAACAAT CGCCGATGTG GTCACCCGAA TCCTCATCGC CGACGACCAG GAAGGCATCC
GCAGCGCCTT CCGCATGA
 
Protein sequence
MWAVALVSVV VAVAVAATGL FRSRLRPRLS APALPAAGVS LAVTLAYLSG AARPTPGVDA 
LGMIESVALM VSAGLVIRYA PLRQAVLSTS AAGLAAAVWP LRVFTPASPL EAIGVSAFWG
LGALLATAMG AYLRFLDVRQ ERAVADTRTA LRLRLARDLH DFLAHDISEM VAHAQAGRVA
GDPLQALERI ENAGQRALST LDGTLDTLHH DRPLSPAGDL GGISEAAERF SAAGSAQVRL
RMDPAVTVPV ETAALAYRIV IEGLTNIRRH APQATRVDLR VSASAGVLEI TMTNDGVTRM
RSRRRGGSGL PGLAGLVEDR GGELVARAVP DGWSLTARLP LEQSPMWSPE SSSPTTRKAS
AAPSA