Gene Sros_6298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6298 
Symbol 
ID8669607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand+ 
Start bp6907418 
End bp6908164 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341766 
Protein GI271967570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.981767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.120697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTA CCTATGAGAT CTGCATCGAC AGCACGGCGG GCGCGCTGGC GGCCGAGCAG 
GCCGGGGCGC ACCGGGTCGA GCTGTGCTCG GCCCTCTTCG AGGGCGGTCT CACCCCGACC 
CTCGGCACCG TCGAGGCGAC CCTCGCCGCG GTCTCGTCGA TCCGCGTCCA CGTGATCATC 
CGTCCCCGTG GCGGTGACTT CATCTACGAC GAGTACGAGA TCGCGGCCAT GGAGCGCGAC 
GTGGCGGCAG TCCGGGAGGC GGGCGCGCAG GGCGTGGTGA TCGGGGTGCT GACGCCGTCG 
GGCGAGGTGG ACGTCGAGGT GGCCAAGCGG CTGATCGGCG CCGCCGGAGG ACTCTCCGTC 
ACCTTCCACC GGGCCTTCGA CATGACCGCC GACCCGTTCG CCGCCCTCGA CACGCTCGCC 
TCGCTGGGAG TCGACCGGGT GCTCACCTCC GGCCAGGACG TCACCGCGCT GGAGGGGGCG 
CCGCTGATCG CGTCCCTGGT CGAGCGGGCG GGCGACGGAC TGATCGTCAT GCCCGGCGGC 
GGCATCACGC CCCGCAACGT GAGCCGCGTG GTGGCGGCGA CGGGGGTCAA GGAGATCCAC 
TTCGCCGCTC TCGTGGACGC GCCCAGCCCC GCCGTCCACC GCAACCCCCA CCCGTTCATG 
GGCGGTGAGC TGCGCCAGCC CGAGTACGCC CGCCTGGTCA CCTCCCCGGG CCTGGTCTCC 
GAGGTGATCA CCGCCTCGGG GGCCTGA
 
Protein sequence
MSLTYEICID STAGALAAEQ AGAHRVELCS ALFEGGLTPT LGTVEATLAA VSSIRVHVII 
RPRGGDFIYD EYEIAAMERD VAAVREAGAQ GVVIGVLTPS GEVDVEVAKR LIGAAGGLSV 
TFHRAFDMTA DPFAALDTLA SLGVDRVLTS GQDVTALEGA PLIASLVERA GDGLIVMPGG 
GITPRNVSRV VAATGVKEIH FAALVDAPSP AVHRNPHPFM GGELRQPEYA RLVTSPGLVS 
EVITASGA