Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6296 |
Symbol | |
ID | 8669605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6905624 |
End bp | 6906448 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003341764 |
Protein GI | 271967568 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0936816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.134571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACC TGCTCTTCGA CGAGCCCGGG CCGCGCGCCC GCCGCAGGAT CCGCGTCGCG ACCGTGGTGG GGGCGGTCGC GGTGCTCGGC CTGCTGGCGC TGGCCGTACG GCAGTTCGCC GCCAACGGCC AGCTCGACGC CGACCGCTGG CAGCCGTACG CGACGTGGCC GATGTGGCGC TACCTGCTCG ACGGGCTCTG GTCCACCGTG CTGGCGGCGG TCGTGTCGGC CGCGCTCGCG ATGGCGGCCG GGCTGGCGCT GGCCCTGGGC CGGCTGTCCC GGCGGCGCTG GGTGCGCCTG CCCGCCGCCG CGTACGTGGA GGTCGTGCGC ACCGTCCCGG CGCTGCTGCT GGTCTACGTC GTGCTGTTCG CGCTGCCCCG CTACGGGCTG GACCTGCCGC TGTTCTGGAA GCTCGTGGTG CCGCTGGCGA TCTCGAACGC GGCGGCGTTC GCGGAGATCT TCCGGGCCGG GATCCTGTCC GTCGAGCGCG GCCAGAGCGA GGCGGGCCTG GCCGTCGGGC TCACCCACGG CCAGACCATG CGCATGATCG TGCTGCCGCA GGCGGCCCGG CGCGTGCTGC CCTCGATCGT CAGCCAGTCG GTCGGCCTGC TGAAGGACAC CTCGCTGGGC TTCGTGGTCA GCTACGCCGA GCTGCTCTAC AGCGGCAAGG TCCTGGCGAC CTACAACGGC CTGCTCATCC AGACCTACAT CGTCGTCGCG CTGGTCTACC TGGTGGTCAA CGCGTCGCTG TCCAAACTCG CCCGCACCCT CGAAGCCCGC CAACCGCGAG CCCACCGACC GCGAAGGAGA CTCGCCCGTG CCTGA
|
Protein sequence | MSNLLFDEPG PRARRRIRVA TVVGAVAVLG LLALAVRQFA ANGQLDADRW QPYATWPMWR YLLDGLWSTV LAAVVSAALA MAAGLALALG RLSRRRWVRL PAAAYVEVVR TVPALLLVYV VLFALPRYGL DLPLFWKLVV PLAISNAAAF AEIFRAGILS VERGQSEAGL AVGLTHGQTM RMIVLPQAAR RVLPSIVSQS VGLLKDTSLG FVVSYAELLY SGKVLATYNG LLIQTYIVVA LVYLVVNASL SKLARTLEAR QPRAHRPRRR LARA
|
| |