Gene Sros_6295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6295 
Symbol 
ID8669604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6904983 
End bp6905627 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003341763 
Protein GI271967567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0101432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.124275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGA TCCTTGATCA CCTGCCCGAG TTCTGGGAAG GCCTGATCGT CACCCTCCAG 
CTCACCGCGG CGTCGTTCCT CGGCGCCGCG GTGGTGGGAC TGGTGATCAC GGCCATGCGG
GTCAGCCCGG TCGGCGTGCT GCGCGGGATC GGCACGGCCT ACGTGGAGAC CTTCCAGAAC
CTGCCCCTGC TGGTGCTGCT GGTGCTCGCC GTCTTCGGCC TGCCGGAGAT CGGGATCAAG
GCCGACCTGC TGGTCACGGC CATCGTGGTC ATCGCGCTCT ACGAGGCCGC CTACATCGCC
GAGGCGCTGC GCTCGGGCGT CAACGCCGTC TCCGCCGGGC AGGGTGAGGC GGCCCGCGCG
CTCGGGCTCA CCTTCGGCCA GTCCCTGCGT CACGTGATCC TGCCGCAGGC GCTGCGCACG
GTGATCCAGC CGCTGGGCAA CATCTTCATC GCGCTGACGA TGAACACCTC TCTGGCGGCC
GCGATCGGCG TGGTCGACCT GACCGCCGCG GCCAACCGGG TGAACCTCAT GGAGGCCCAG
CCCATCCCGA TCTTCGTCGG GGCGGGCCTG GCCTACGCGC TGATCGCCGC CTGTGCCGGG
TTCGTCACCG GGCGGCTCGA ACGACGGCTG GTGATGGTCC GATGA
 
Protein sequence
MSAILDHLPE FWEGLIVTLQ LTAASFLGAA VVGLVITAMR VSPVGVLRGI GTAYVETFQN 
LPLLVLLVLA VFGLPEIGIK ADLLVTAIVV IALYEAAYIA EALRSGVNAV SAGQGEAARA
LGLTFGQSLR HVILPQALRT VIQPLGNIFI ALTMNTSLAA AIGVVDLTAA ANRVNLMEAQ
PIPIFVGAGL AYALIAACAG FVTGRLERRL VMVR