| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6293 |
|---|
| Symbol | |
|---|
| ID | 8669602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6903316 |
|---|
| End bp | 6904044 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003341761 |
|---|
| Protein GI | 271967565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.118906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0827304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAGG TGCAAGGGCT GAACAAATGG TTCGGCGATC ATCACGTGCT GCGCGACATC
GACCTTGAGG TGGCGCAGGG CGAGGTCGTC GTGGTGATCG GCCCCTCCGG GTCCGGCAAG
TCCACGCTGT GTCGCTGCCT CAACCGGCTG GAGACCGCGG GCTCGGGCGA CATCCTCATC
GACGGCGTCC CGGCCCCCGT GGAGGGCCGC GAGCTGGCCC GGCTCCGGGC CGACGTCGGC
ATGGTCTTCC AGTCGTTCAA CCTCTTCCAG CACAAGAGCG TGCTGGAGAA CGTCATGCTC
GCGCCGGTGA AGGTGCGCGG CGTCAGCCGT ACCGAGGCGG AGAGCACCGC CCGGCAGCTG
CTGGCGCGCG TCGGCATCGC CGAGCAGGCC GGCAAGCTGC CCGCGCAGCT CTCGGGCGGC
CAGCAGCAGC GGGCGGCCAT CGCCCGCGCG CTGGCCATGC GGCCCAAGGT GATGCTCTTC
GACGAGCCCA CCTCGGCGCT CGACCCCGAG ATGGTCGGCG AGGTCCTGGA CGTGATGGTC
CAGCTCGCCG CCGACGGCAT GACCATGGTC GTGGTCACCC ACGAGATGGG CTTCGCCCGC
AGGGCCGCCG ACCGCGTGGT GTTCATGGAC GGCGGCCAGA TCGTCGAGAC GGCCGAGCCG
AACGCCTTCT TCGAAGCTCC CAAGACGGAC CGGGCCAGGG ACTTCCTGGC CAAAGTACTC
ACACACTGA
|
|---|
| Protein sequence | MIQVQGLNKW FGDHHVLRDI DLEVAQGEVV VVIGPSGSGK STLCRCLNRL ETAGSGDILI
DGVPAPVEGR ELARLRADVG MVFQSFNLFQ HKSVLENVML APVKVRGVSR TEAESTARQL
LARVGIAEQA GKLPAQLSGG QQQRAAIARA LAMRPKVMLF DEPTSALDPE MVGEVLDVMV
QLAADGMTMV VVTHEMGFAR RAADRVVFMD GGQIVETAEP NAFFEAPKTD RARDFLAKVL
TH
|
|---|
| |