| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6282 |
|---|
| Symbol | |
|---|
| ID | 8669591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6892346 |
|---|
| End bp | 6893107 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003341750 |
|---|
| Protein GI | 271967554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00858141 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0322686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGTC GCTTGGTAGG TAGACGTGTA CTGGTCGTGG GAGCGGGCAC CCGCCCCTCC
CTCGACCCCG AACCGCCGGT CGGGAACGGG CGGGCGATCG CGGTCGAGGC CGCGCGGCAG
GGCGCCACGG TGGTCTGCGC GGACGTGGAC GAGGACGCGG CCGCCGAGAC GGCCGGGTGG
ATCGGCCGCG AGGGCGGGAA GGCCGAGGTG ATCACCGTGG ACCTGGCCGA CGGTGACGCC
TGCGAGGCGC TGACCGGCCG GGCGGGCGCG GTGGACGGCA TCGTGCTCAA CGCCGCGATC
GGCTCCGGGC TGGCCCTGGC GGGGACCAGC GCCGCCGACT GGGACCGGGT GTTCGCGGTC
AACCTGCGCG GCCACTTCCT GGTCTGCAAG GGCGCGCTGC CCCTGCTCGG CTCCGGCGGC
TCGATCGTGT TCATCGGTTC GGTGGCCGGG CTGCGCCCCG GCAGCCTGAT CCCGGCCTAC
GACGCCTCCA AGGCGGGGCT GGTCGGCCTG GCCAGGCACG TCGCGCTGGA GGGCGCCGGC
CTCGGGATCC GGGCGAACCT GGTGGCCCCC GGCCTGATCG ACACCCCGCT CGGCCGGGAC
GCGGCCAGGC TCTGGGAGCA CCGCGGCCAG GTGATGGTCC CGATGGGCCG CCAGGGAACC
GCCTGGGAGG TGGCGAAGGT GACGACCTTC CTGCTCTCGG ACGACGCGAG CTACGTCACC
GGCCAGGTCC TCGCCGTGGA CGGCGGTCTC ACCCTGTTGT AG
|
|---|
| Protein sequence | MNGRLVGRRV LVVGAGTRPS LDPEPPVGNG RAIAVEAARQ GATVVCADVD EDAAAETAGW
IGREGGKAEV ITVDLADGDA CEALTGRAGA VDGIVLNAAI GSGLALAGTS AADWDRVFAV
NLRGHFLVCK GALPLLGSGG SIVFIGSVAG LRPGSLIPAY DASKAGLVGL ARHVALEGAG
LGIRANLVAP GLIDTPLGRD AARLWEHRGQ VMVPMGRQGT AWEVAKVTTF LLSDDASYVT
GQVLAVDGGL TLL
|
|---|
| |