| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6267 |
|---|
| Symbol | |
|---|
| ID | 8669572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6873015 |
|---|
| End bp | 6874112 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Small-conductance mechanosensitive channel-like protein |
|---|
| Protein accession | YP_003341735 |
|---|
| Protein GI | 271967539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.115222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGAT GGATCATCCT GCTCGCTTCC ATGTTGGCCG CCGCAGCCTG CGTGGAGATG
GTGCGGAGGG CGTTGCGGTG GCGGCTGATC GGCGAGAAGT GGGTTCTCGC CGCTCCGCTC
GTGCGCCGCT GCACCTGGCC GGGGTTCGCC ACGGCGGTCG TGGTGACCGC CAACACGCTC
TACCGGCCGG GCATGGCCGA GGGGCAGGTC GACGACGCGA TCGACCGGAT ACTCAGCCTG
ACCATGATCG GATGTGTCAC CTGGCTGGTC ATCCAGGCCG CCTACGCCGT CACCGACGTG
GTGCTGGAGC GGCTGGTCGT CGTCCAGGGC GAGCGCAACC GGCGGGCCCG CAGGATCCGC
ACCCAGATCA CCCTGGTCCG CCGGGTGGCC ACGGCGGTGG TCATCGTGCT GGCGATGGGC
GCGATGCTCT TCACCTTCCC GCAGGTGCGC GCGCTCGGCG CCGGGCTGCT GGCCTCGGCC
GGGATCGCCG GCGTCGTCGT CGGCATCGCG GCCCAGTCCA CCCTGGGCAA CCTGCTCGCG
GGGCTGCAGC TGGCCTTCAG CGACGCGCTC CGGCTGGACG ACGTCGTGGT GGTGGAGGAG
GAGTGGGGCC GGATCGAGGA GCTCACCCTC ACCTACGTGG TGCTGCGCCT GTGGGACGAA
CGCAGGCTGG TGCTGCCGGT CTCCTACTTC ACCACCAACC CGTTCGAGAA CTGGACCCGG
CACGGCAGCC GGGTGATCGG CGCGGTGTTC CTCCGGCTGG ACTGGTCGGT CCCGGTGGAG
GAGCTCCGGG CCGAGCTCTA CCGCGCCCTG CGCGAGCACC CGCTGTGGGA CCAGAAGGAC
TGGGTCCTCC AGGTCACCGA CACCCTTCCC GGCGGCCTGC TGGAGCTGCG CGCCCTGATG
AGCGCCGCCG ACTCACCCAG CGCCTGGGAC CTCAAGTGCG ACATCCGCGA GCACATGGTG
AAGTTCGTCC GGGACAAGTA TCCCGAGTCG CTGCCCCGCT TCCGGGTGAT GGAGGAGGGG
GCTCCGCTGT CCCGGTTCGG GGCGGTGGAG CACCAGTCCG GGGCGGCGGG ACACCAGGCC
GGGACGGCCC GGTACTAG
|
|---|
| Protein sequence | MSRWIILLAS MLAAAACVEM VRRALRWRLI GEKWVLAAPL VRRCTWPGFA TAVVVTANTL
YRPGMAEGQV DDAIDRILSL TMIGCVTWLV IQAAYAVTDV VLERLVVVQG ERNRRARRIR
TQITLVRRVA TAVVIVLAMG AMLFTFPQVR ALGAGLLASA GIAGVVVGIA AQSTLGNLLA
GLQLAFSDAL RLDDVVVVEE EWGRIEELTL TYVVLRLWDE RRLVLPVSYF TTNPFENWTR
HGSRVIGAVF LRLDWSVPVE ELRAELYRAL REHPLWDQKD WVLQVTDTLP GGLLELRALM
SAADSPSAWD LKCDIREHMV KFVRDKYPES LPRFRVMEEG APLSRFGAVE HQSGAAGHQA
GTARY
|
|---|
| |