Gene Sros_6254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6254 
Symbol 
ID8669559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6861776 
End bp6862402 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341722 
Protein GI271967526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.170118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0153866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGATG GTCCGGGGTT GCGGGAACGT AAGAAGCTGC GCACCCGTCG CGCGCTGATC 
GAGGCGGCCC TGCACCTGTT CGAGGAGAAG GGCTACGAGG AGACCACCGT CGCGGAGATC
GCCGCGGCGG CGGACATCTC GACGCGGACG TTCTTCAGCT ACTTCGCGAG CAAGGAGGAC
GTGGTCTTCT TCGACGGCCA GGCGCGCCTC GACGAGATCA TCGACATGAT CGCGCATCGG
CGGGCCGGAG AGACGGTGGT CGAGCTCCTG CTCCGCGTGG GCGAGCTGAG CATGGCCCGG
ACCTTCGCCG AGACCGATCG CCTCATGGAG CTGACTCCCG CCCGCACCCG CCTGATCATG
TCGGTCCCGG TGCTTCAGGC CCGCGCGCTG CGGCTGCTGT TCGACACCCA GCTGCAGCTG
GCCGAGGCGC TCCATCGGGC CTACTCCGAG GAGATCGACC TCGTCGAGGC CGCCGCCGCC
GTCGGCGCCC TCGCCGGAGC GGCCAAACTC GCCACGATGG CCTGCCTGAA CCGGGGCGAC
CCGCCGGAGC GGATATGGGA GGCGGTGCGC AGGGCCATCG AGATCGCCAT GCGGGGCGTG
CAGTCGGCGG GCTCACGGCC CTCCTAG
 
Protein sequence
MVDGPGLRER KKLRTRRALI EAALHLFEEK GYEETTVAEI AAAADISTRT FFSYFASKED 
VVFFDGQARL DEIIDMIAHR RAGETVVELL LRVGELSMAR TFAETDRLME LTPARTRLIM
SVPVLQARAL RLLFDTQLQL AEALHRAYSE EIDLVEAAAA VGALAGAAKL ATMACLNRGD
PPERIWEAVR RAIEIAMRGV QSAGSRPS