Gene Sros_6222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6222 
Symbol 
ID8669527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6831480 
End bp6832991 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content69% 
IMG OID 
Productsugar ABC transporter ATP-binding protein 
Protein accessionYP_003341694 
Protein GI271967498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.597291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC CCGTCCCGAT CCTGCGGATG CGCGGGATCA GCAAAGAGTT CCCCGGCGTG 
AAGGCGCTCT CCGGCGTCGA CTTCCGGCTG CTGCCGGGAG AGGTGCACGC GCTCATGGGG
GAGAACGGCG CCGGGAAGTC GACCCTCATC AAGGTCCTCA CCGGTGTCTA CGACATCGAC
GCCGGAGAGA TCGAACTGGG CGGCGAGAAG GTCGCCTTCG CCAGTCCGCT CGCCGCCCAG
CAGGCCGGGA TCAGCACCGT CTACCAGGAG GTCAACCTCT GTACGAACCT CTCGGTCGCG
GAGAACATCT TCATCGGCCG CGAGCCGCGC CGCCTGGGCC GGATCCAGTG GGGCCGGATG
CGCCGCCGGG CCGCCGAGCT GCTCGCCCGG CTGGAGCTCG ACATCGACGT GTCGGCACCG
CTGTCGGCCT ACTCGCTGGC CGTGCAGCAG ATGGTTGCGA TCGCCAGGGC TGTGGACATC
TCGGCCCGGG TGCTGATCCT GGACGAGCCC ACCTCCAGCC TGGACACCGG GGAGGTGGCC
CAGCTCTTCC GGGTGATGCG CAAGCTCAAG GAGGAGGGCA TCGCGATCCT GTTCGTCTCG
CACTTCCTCG ACCAGGTCTA CGAGATCTCC GACCGCATGA CGATCCTGCG CAACGGCCGG
CTCGTGAGCG AGCACCTCAC CAGCGAGCTC GGCCAGGTCG AGCTGGTCGG CAAGATGATC
GGCCGCGAGC TCGCCGACCT GGAGAAGCTG GAGGGCAAGC CTCTCGCCCG GGAGACCAAA
GCCCTGATGG AGGCCGAGGA TCTGGGCAGG GCCGGGGCCG TCGAGCCGTT CACCCTCACC
ATCCACGAGG GCGAGGTCGT CGGCCTGGCC GGGCTGCTCG GCTCCGGGCG CACCGAGATC
GCCCGTCTGC TGTTCGGCGC CGACCACGCG GGCACCGGCT CCCTCAAGAT CGACGGTCGG
CCGGTGAGCC TGCGCACCCC GCGGGCGGCC ATGAACCACA GGATCGCCTT CTGCTCGGAG
AACCGCCGTG CCGAGGGGCT CATCCCCGAC CTCACCGTGC GGGAGAACCT CATCCTGGCC
CTGCAGGCGG CACGCGGCTG GAGCCGGCCG ATCCCGCGCC GCAGGCAGGA CGAGCTGGTC
GAGAAGTACG TCTCCGTGCT GAAGATCAGC CCGGCCAACC CCGAGCAGCT GATCAGGAAC
CTCAGCGGCG GCAACCAGCA GAAGGTGATG CTGGCCCGCT GGCTCATCCT CGAACCCCGC
CTGCTCATCC TCGACGAGCC CACCCGGGGC ATCGACGTCG GCGCCAAGGC CGAGATCCAG
CGCCTGGTCG CCTCCCTGTC CGACGGCGGC ATGGCCGTGC TGTTCATCTC CGCCGAGCTG
GAGGAGGTGC TGCGGCTCAG CCACAAGATC GGTGTGCTGC GCGACCGCAG GCTGGTCGCC
GAGCTGGACA ACGACGACGA CCTCACGACC GACGTCCTCA TGGAGACGAT CGCGAGCGGA
GCCCGCGCAT GA
 
Protein sequence
MAAPVPILRM RGISKEFPGV KALSGVDFRL LPGEVHALMG ENGAGKSTLI KVLTGVYDID 
AGEIELGGEK VAFASPLAAQ QAGISTVYQE VNLCTNLSVA ENIFIGREPR RLGRIQWGRM
RRRAAELLAR LELDIDVSAP LSAYSLAVQQ MVAIARAVDI SARVLILDEP TSSLDTGEVA
QLFRVMRKLK EEGIAILFVS HFLDQVYEIS DRMTILRNGR LVSEHLTSEL GQVELVGKMI
GRELADLEKL EGKPLARETK ALMEAEDLGR AGAVEPFTLT IHEGEVVGLA GLLGSGRTEI
ARLLFGADHA GTGSLKIDGR PVSLRTPRAA MNHRIAFCSE NRRAEGLIPD LTVRENLILA
LQAARGWSRP IPRRRQDELV EKYVSVLKIS PANPEQLIRN LSGGNQQKVM LARWLILEPR
LLILDEPTRG IDVGAKAEIQ RLVASLSDGG MAVLFISAEL EEVLRLSHKI GVLRDRRLVA
ELDNDDDLTT DVLMETIASG ARA