Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6192 |
Symbol | |
ID | 8669494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6794416 |
End bp | 6795711 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC-type sugar transport system periplasmic component-like protein |
Protein accession | YP_003341664 |
Protein GI | 271967468 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0222852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA GGGTCGTGCT GGCCGCAGGC CTCCTCGTTC TGGCCGCCGG ATGCGGTTCG GAATCGCCCG CGGCAGCCCC CGACGAGCCG GTGAAGATCA AATTCCAGAG CCTCGCCTGG CAGAAGGAGT CGATCGCCGC CAACAAGCAG CTCGTCGAGG AGTGGAACAA GGCCAACCCC AAGATCCAGG TCGAGTACAT CCAGGGGAGC TGGGACAACG TCAACGACCA GCTCGTCACC TCCTTCGAGG CGGGCGACCC CCCGGACGTC ATCCACGACG ACTCCCCGGC GCTGTCCGGC TTCGCCAACC GCGGCTACCT GCTGGACCTC ACGGACAAGG TCCCGGCCGA GCTGAAGAGC GACATCCCGC AGGCCGCCTG GGACACCGTC ACCTTCGGCG ACGGCAAGGG CGGGCAGGGC GTGTACGGCG TGCCGTTCCT CCAGGAGTCG CAGGTCATCA TCGGCAACAA GAAGCTGCTC GACAAGGCGG GCGTGCGCAT CCCGACCCCG GAGAATCCGT GGACGTGGGA CGAGTTCGCC GAGATCTCCA AGAAGCTCAC CAAGGGTGAC GCCTACGGTG TCGCCTGGCC GATGAAGTCG CCGGTCAACA AGGTGCTCAA CCTGGGCCTG AACTTCGGCG GCACGTTCTT CCAGACCGAC GCCGCCGGCA AGACGACGGT GAAGGTGGGC GCCGAGGAGC GCGAGGTGCT CCAGCGCATC CACGACCAGC TCCACAAGGA CAAGTCCGCC GACCCGTCCG CGCTCGGCAT GGGCTCCGCC GACCCGCTGC CCGGCTTCTA CGCCGGCAAG TACGCGATGC TGCCCGTCGG CGTCTACCTG CGCCAGCAGG TCGTGGAGCA GGCGCCGGAC GGCTTCGAGT GGGTCACCCT CCCGCCGCTG AAGGGCGCCA CCGCCGAGCA GGGCGCCGTC TCGCAGACGC TGTCGGTCGC CACCGACAGC AAGTATCCCG AGCAGTCGCT GAAGTTCATC TCCTTCTTCC TGAACGGTCC GAACCAGGTC AAGCTCGCCA AGGGCGACTG GCTGCTGCCG ACCTCGGTCA AGGCCGCGGC CGACCCGGCC ATGACGACCG AGGAGAACGG CTGGAACGTG GCGACCGCAT CGGTCAAGAA CCTCGTGGTC GCGCCGTTCC TGAAGGTCAA CGGCTTCGAC GAGTGGAAGA GCAAGGTGGC CACGCCGGCG CTGCAGCAGT ACTTCGCCAA CAAGATCACT CTCGACGAGA CGGCGAAGAA GCTGGTCGAC GAGGGCAACA AGGTGCTGGA GCGGTACAAC CAGTGA
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Protein sequence | MRKRVVLAAG LLVLAAGCGS ESPAAAPDEP VKIKFQSLAW QKESIAANKQ LVEEWNKANP KIQVEYIQGS WDNVNDQLVT SFEAGDPPDV IHDDSPALSG FANRGYLLDL TDKVPAELKS DIPQAAWDTV TFGDGKGGQG VYGVPFLQES QVIIGNKKLL DKAGVRIPTP ENPWTWDEFA EISKKLTKGD AYGVAWPMKS PVNKVLNLGL NFGGTFFQTD AAGKTTVKVG AEEREVLQRI HDQLHKDKSA DPSALGMGSA DPLPGFYAGK YAMLPVGVYL RQQVVEQAPD GFEWVTLPPL KGATAEQGAV SQTLSVATDS KYPEQSLKFI SFFLNGPNQV KLAKGDWLLP TSVKAAADPA MTTEENGWNV ATASVKNLVV APFLKVNGFD EWKSKVATPA LQQYFANKIT LDETAKKLVD EGNKVLERYN Q
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