| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6178 |
|---|
| Symbol | |
|---|
| ID | 8669480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6779592 |
|---|
| End bp | 6780560 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_003341651 |
|---|
| Protein GI | 271967455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.927317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.809899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC CCCTGCTGGA GATCGAGAAC CTGAACGTGC AGCTCGCGGC AGGCAAGGCC
GCGCGCCCCA TCCTCGACGG GGTGTCACTG CACGTCGCGC AAGGCGAGAC CGTCGGACTG
GTCGGCGAGT CCGGGTCCGG CAAGTCCGTC ACCTGTCGTT CGGTGCTCGG CCTGTTCCCC
GAAGGGGCCC AGACCTGCGG AAGCCTGCGG CTGGACGGGA ACGACGTCCT GACGATGTCC
CCCACCCGGC TCCGCGAGCT GCGCCGCCAC GACGTCTCCA TGGTCTTCCA GGACCCCCGA
GCATCGATCA ACCCGCTGCG CAGGATCGGC GACTTCGTCA CCGAAGGGAT ACGGGCGGGC
GGGGTGCCGC GGAAAGACGC GCTCAAGCGG GCCGGGGAGT TGCTGGAGTC GGTCGGAATC
CGTGATCCCC GCGCGGCGCT GCGCAGGTAT CCGCACGAGT TCTCCGGCGG CATGCTGCAG
CGCGTGATGA TCGCCGGCGC GCTCGCCGGA GAGCCCCGGC TGCTGCTGGC CGACGAGCCC
ACCACCGCGC TGGACGTCAC CACCCAGGCC GAGGTGATCT CGATCCTCAC CGACCTGCGG
ACCGAGCGTG CCATGGGGAT GCTCTTCGTC ACCCACGACC TGGAACTGGC CGCGGCGATC
TGCGACCGCG TCTACGTGAT GTACGCGGGA CGGATCGTGG AAACCCAGTC CGCCGACGGG
CTCTTCGGCC GGCCCCGCCA TCCCTACACC GCGGCGCTGC TGGCCTCGAC CCCGCAGCTG
GACTCGGACC GGCCGCCGCG CAGCGTCCCC GGACGCCCGG TGTCACTCGC CGAGACTTCG
CCCGGATGCG CCTTCGCGGT CCGCTGCGCC CACGCGCGAC CCCGCTGCAC CGAGCACGAG
CCCGTCCAGC GGGAGATCGA CGGCGCTCAC GTGGCCTGCC TGCGTGCGGA GGAGCTGATC
AATGACTGA
|
|---|
| Protein sequence | MTTPLLEIEN LNVQLAAGKA ARPILDGVSL HVAQGETVGL VGESGSGKSV TCRSVLGLFP
EGAQTCGSLR LDGNDVLTMS PTRLRELRRH DVSMVFQDPR ASINPLRRIG DFVTEGIRAG
GVPRKDALKR AGELLESVGI RDPRAALRRY PHEFSGGMLQ RVMIAGALAG EPRLLLADEP
TTALDVTTQA EVISILTDLR TERAMGMLFV THDLELAAAI CDRVYVMYAG RIVETQSADG
LFGRPRHPYT AALLASTPQL DSDRPPRSVP GRPVSLAETS PGCAFAVRCA HARPRCTEHE
PVQREIDGAH VACLRAEELI ND
|
|---|
| |