Gene Sros_6162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6162 
Symbol 
ID8669464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6759977 
End bp6761224 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content75% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003341635 
Protein GI271967439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.611098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000124452 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGTCGTGG GCGATGCGAC CCTGGCGATC GCCGTCGGCG CGCTGGGCGC GTCGTTGACG 
GTCACCAACG CGGTCGCCCA GCAGTCGCCG CTGTCGTGGA GCGTGTGGGC CGCGGCCGTC
GCGCAGCTCA TCGGCGGGCT GGCCCTGATC GCCAGGCGAC GGTCGCCGGT CGCCGTCGTG
ATGCTGTGTG TCGTGCTGTG CGCCTTCGCC GCTCCGGTGG CGGGGCCGTT CGCCACCTAC
GCGATCGCGG TCTACGGCAG GGGCCGTCCC CGTGACTGGA TCAGCGTCAT CGTTCTGTCG
ATGACGCTGA GCCAGCCCTG GAACGCCTCC GGGCCGGTGC TCGAGATCCT GCTGAACACC
GCGACCAACT CCCTCTTGGG GATCGCCCCG GCGTTGCTCG GCATGTGGCG GGCCTCCCGG
CGGCGGCTGT TCCAGGCCCT GGCCGACCGG GCCGAGCGCG CAGAGCGCGA GCAGGAGCTG
ATGGCCGAGA GGGCCAGGTC GGAGGAGAGG GCCCGGCTCG CCGGCGAGAT GCACGACGTC
GTCACCCACC GGGTCAGCCT CATGGTCCTG CGCGCCGGCG CGCTGCGGAC CATCGCCCGC
GACGAGGTGG TCCGCGAGGC GGCCGAGGAG CTGCGCCAGG TCGGCTGCCA GGCTTTGGAG
GAGCTGCGCG ACCTGGTCGG CGTGCTCCGT TCGGAGGAGA CCTTCGGCTC CGCGCGCACC
GCCGAGCCCG TCGTGCTCGA CCTGACCGGC CTGGTCGCGG AGTCCAGGGC TGCGGGGATC
GAGGTCGGCC TCGTCACCGA GGGCGAGCCG CTCCCCACGC CGCCCGTGGT GGACCGCACC
GCCTACCGGG TCGTCCAGGA GGCGCTGACG AACGTGCACA AGCACGCGCC CGGGGCGCGG
GTGACCGTCC AGGTGAGCTA TGCGGGCGAT CTGCTCCGCA TCCTGGTGCG CAACACCGCG
GCGGACGGGG GCACCGAGAT CATGCTCGGG GAGGGCGGCA CCGGTCTGAG CGGCCTGCGC
CAGCGCGTCG AGCTCGTCCA TGGCTCGCTG CGGGCGGGGC CGTCACAGGA CGGGGGCTTC
GAGGTGCGGG CCGCGCTGCC GGTAGCCCCC GGCGCGGGAC CGGCGGGCCG TACGGCCGGG
CACGGTGCCG AGGGCGGATC GGCGCCGAGG GCGGCCGGGC ACGGGCCCGG CGCCGCCGTG
CCGCGCCCCG CCGCGGAGTC CGCCGGCGTG ATCCGGGTGT CCCCGTGA
 
Protein sequence
MVVGDATLAI AVGALGASLT VTNAVAQQSP LSWSVWAAAV AQLIGGLALI ARRRSPVAVV 
MLCVVLCAFA APVAGPFATY AIAVYGRGRP RDWISVIVLS MTLSQPWNAS GPVLEILLNT
ATNSLLGIAP ALLGMWRASR RRLFQALADR AERAEREQEL MAERARSEER ARLAGEMHDV
VTHRVSLMVL RAGALRTIAR DEVVREAAEE LRQVGCQALE ELRDLVGVLR SEETFGSART
AEPVVLDLTG LVAESRAAGI EVGLVTEGEP LPTPPVVDRT AYRVVQEALT NVHKHAPGAR
VTVQVSYAGD LLRILVRNTA ADGGTEIMLG EGGTGLSGLR QRVELVHGSL RAGPSQDGGF
EVRAALPVAP GAGPAGRTAG HGAEGGSAPR AAGHGPGAAV PRPAAESAGV IRVSP