Gene Sros_6148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6148 
Symbol 
ID8669447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6744575 
End bp6745405 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content72% 
IMG OID 
Productbranched chain amino acid aminotransferase 
Protein accessionYP_003341621 
Protein GI271967425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0594228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGC CCGTATGGGT CAACGGGAAA CTTATCGATC CGGAGCAGGC CACCGTCTCG 
GTGTTCGACC ACGGTCTGAT GGTCGGGGAC GGCGTCTTCG AGACCATCAA GTGCGTCAAC
GGCGCCTCCT TCGCCCTCAC CCGCCACCTC GACCGGCTCC GGCTCTCCGC CCAGCGGATG
GACCTGCCCG AGCCCGACGT CGACGCGATC ACCGAGGGCA TCCGCGCCTG CCTGGCCGAG
GCGCCCCCGT GGCAGCTCGG CCGGATCCGG GTCACCTACA CCAGCGGCCC CGGCCCGCTC
GGGTCCGACC GGGGGGACAA GGGCTGCACC ACGGTGGTGA TCGTCGACGA GCAGAAGCCG
TTCCCGGCCA CCGCCGACGT CACCGTCGTG CCCTGGCCGC GCAACGAGCG CGGCGCGCTC
GCCGGGGTGA AGAGCACCTC CTACGGGGAC AACGCCAAGG CCCTGTTCTA CGCCAAGGCC
AGGGGCGGCG GCGAGGCGAT CTTCCAGAAC CTGGCGGGCG ACCTCTGCGA GGGCACCGGC
AGCAACATCT TCATCGTGCG CGAGGGCCGC CTGCTCACCC CCACGCTGTC CTCCGGCTGC
CTGGCCGGGG TCACCCGGGC GCTCACGCTG GAGTGGTGCG GCGGCTCCGA GGAGGACGTC
CCGCTGTCGG CCCTCTACGA GGCCGAGGAG GCGTTCCTGA CCTCCACCAC CCGTGACATC
CAGCCGATCC GCGCGGTCGA CCAGACCGTG CTGCCGGCCG CGCCCGGCCC GATCACCGCC
AAGGCGATGC GGGTCTTCGC CGAGCGCGGC GCCGCCGACC TCGACCCGTG A
 
Protein sequence
MNVPVWVNGK LIDPEQATVS VFDHGLMVGD GVFETIKCVN GASFALTRHL DRLRLSAQRM 
DLPEPDVDAI TEGIRACLAE APPWQLGRIR VTYTSGPGPL GSDRGDKGCT TVVIVDEQKP
FPATADVTVV PWPRNERGAL AGVKSTSYGD NAKALFYAKA RGGGEAIFQN LAGDLCEGTG
SNIFIVREGR LLTPTLSSGC LAGVTRALTL EWCGGSEEDV PLSALYEAEE AFLTSTTRDI
QPIRAVDQTV LPAAPGPITA KAMRVFAERG AADLDP