Gene Sros_6140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6140 
Symbol 
ID8669438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6735931 
End bp6736686 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content78% 
IMG OID 
Productputative transcriptional regulator, PaaX family 
Protein accessionYP_003341613 
Protein GI271967417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.353105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.192867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG AAGACGACCC GCTCGGGCTC CGGCCGCTGA CCGCGCGCTC GGTCATCCTC 
AGCACGCTGC TGGGCACCCA CCCCCCGCGG CTGAGGGCAG GCCGCCTGGT CCGCGTGGGC
GCCCTGTTCG GCATCTCCGA GGGCACGGTC CGGGTCGCGC TGTCACGCAT GGTCGCCGCG
GGCGACCTCG GCCAGCCGGA CGGCTTCTAC GAGCTCAGCG AGCGCCTCCG CCTGCGGCAG
GCCCGCCAGG ACGAGAGCCG CTCGCCCAGC ACCCGCGCCT GGGACGGCGC GTGGGAGGTC
GCGATCGTGA CCGCCGAGCG GCGGCCCGCC GCCGAACGGG CCGCGCTCCG GGAGGCCATG
GCGGCGCTGC GCCTGGCCGA GATCCGCGAG GGCGTGTGGA TGCGGCCGGA CAACCTGAGC
AGGGACCGGC CCGCCGTCGT CGCCGGCCAG TGCGCCTTCC TGCGGGCGGT CCCGGAGGAG
GACCCCGCCC GGCTGGCGGG ATCCCTGTGG GACCTGCCCG CCTGGGCCCG GCACGCGCGG
GCGCTGCAGA GCGCCTTCGA CGCGGCGGCC ACCATCTCCG GCCGGTTCGC CCTGGCCGCC
GCCGCGCTGC GTCACCTGCT GGCCGACCCC CTGCTGCCGG CCGGCCTGCT GCCCGGCGAC
TGGCCCGGCG ACGGCCTCAG GCACCGCTAC GACCTGTTCG AGGCCGAGTT CGGGGCCCTC
GTCCGCGACC ACCTGCGGGC CACGGACGGC CCGTAG
 
Protein sequence
MTNEDDPLGL RPLTARSVIL STLLGTHPPR LRAGRLVRVG ALFGISEGTV RVALSRMVAA 
GDLGQPDGFY ELSERLRLRQ ARQDESRSPS TRAWDGAWEV AIVTAERRPA AERAALREAM
AALRLAEIRE GVWMRPDNLS RDRPAVVAGQ CAFLRAVPEE DPARLAGSLW DLPAWARHAR
ALQSAFDAAA TISGRFALAA AALRHLLADP LLPAGLLPGD WPGDGLRHRY DLFEAEFGAL
VRDHLRATDG P