| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6101 |
|---|
| Symbol | |
|---|
| ID | 8669399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6690731 |
|---|
| End bp | 6692467 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_003341575 |
|---|
| Protein GI | 271967379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.692121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA CGCACGAAGC GGGATCACTG CGCAAGGAAC ACGCCGGGCA GCAGGTGACG
CTGGCCGGTT GGGTGGCGCG CCGCCGCGAC CACGGCGGTG TGGTCTTCAT CGACCTGCGT
GACGCCTCCG GCTCCTCCCA GGTGGTCTTC CGCGAGGAGG ACGACGCGCA CGGCCTGCGC
GCGGAGTACT GCGTCAAGGT CGTCGGAGAG GTGCGGGTCC GTCCGGAGGG CAACGAGAAC
CCCGAGCTGC CGACCGGTGC GATCGAGGTC GTCGCCTCCG AGGTCGAGGT GCTCAGCGAG
TCCGCGCCGC TGCCGTTCCC GATCGAGGGC AACGCGGGGG TGTCGGAGGA GGCCCGGCTC
AAGTACCGCT ACCTCGACAT CCGCCGGCAG CAGGTCGCCA ACGCCATGCG GATCCGCTCC
AAGGCCACCT ACCTGGCCCA CGAGGTGATG AACGAGCACG GGTTCAACTA CATCGAGACC
CCGACGCTGA CCCGTTCCAC CCCCGAGGGC GCCCGCGACT TCCTGGTCCC GGTCCGGCTG
CAGCCCGGCA GCTGGTACGC CCTGCCGCAG TCGCCGCAGC TGTTCAAGCA GCTGCTCATG
GTCGCCGGCA TGGAGCGCTA CTACCAGCTC GCCCGCTGCT TCCGCGACGA GGACCTGCGC
GCCGACCGGC AGCCGGAGTT CACCCAGATC GACGTCGAGA TGTCCTTCGT GGACCAGGAC
GACGTCATCG CCCTGGGCGA GGCCCTGGTC GGCCGCATCT GGAAGGAGAC GATCGGCTAC
GAGCTGCCGA CGCCGCTGCC CCGGATGACC TACTGGGACG CCATGTCCCG CTACGGCTCC
GACAAGCCGG ACCTGCGGTT CGGCCAGGAG CTCGTCGAGA TGACCGAGTA CTTCGCCGAC
ACCACCTTCC GCGTGTTTCA GGCGCCGTAC GTGGGCGCCG TGGTCATGCC GGGCGGCGCC
TCCCAGAGCC GCAAGGAGCT GGACGGCTGG CAGGACTGGG CCAAGTCGCG CGGCGCCAGG
GGCCTGGCCT ACGTGCTCGT CGGCGAGGAC GGCGCGCTCG GCGGCCCGGT CGCCAAGAAC
CTCTCCGAGA CCGAGGCCGC GGGCCTGGCC GCCAAGACGG GTGCCAAGCC CGGTGACGCG
ATCTTCTTCG CGGCCGGTAC GGCCGCCGCC TCGCGTGACC TGCTCGGCGC GGCACGCCTG
GAGATCGGCC GCCGCTGCGG TCTGATCGAC GAGTCGGCGT GGAACTTCCT CTGGATCGTC
GACGCCCCCA TGTTCGAGGA GGACGGCGAG GGCGGCTGGA CCGCGGTCCA CCACCCGTTC
ACCGGGCCCA AGCCCGAGTG GGCCGACAAC TTCCAGGACC ACCCCGGCGA GGCCCTGGCC
TACGCCTACG ACATGGTCTG CAACGGCATG GAGATCGGCG GCGGCTCGAT CCGTATCCAC
CGGGCCGAGA TGCAGCAGCG CGTCTTCGAC GTGCTCGGCA TCTCCAAGGA GGAGGCGGAG
AACAAGTTCG GCTTCCTGCT GGAGGCGTTC AAGTACGGCC CGCCGCCGCA CGGGGGCATC
GCCTACGGCT GGGACCGGAT CTGCATGCTC CTGGCGGGCG GCGACTCCAT CCGCGACGTC
ATCGCCTTCC CGAAGACGGC GTCCGGCTTC GACCCGCTGA CCGGCGCGCC CACTCCCATC
ACGGGTGAGC AGCGCAAGGA GGCGGGCGTG GACGCCAAGC CGAAGGCGGA GGCCTAG
|
|---|
| Protein sequence | MIRTHEAGSL RKEHAGQQVT LAGWVARRRD HGGVVFIDLR DASGSSQVVF REEDDAHGLR
AEYCVKVVGE VRVRPEGNEN PELPTGAIEV VASEVEVLSE SAPLPFPIEG NAGVSEEARL
KYRYLDIRRQ QVANAMRIRS KATYLAHEVM NEHGFNYIET PTLTRSTPEG ARDFLVPVRL
QPGSWYALPQ SPQLFKQLLM VAGMERYYQL ARCFRDEDLR ADRQPEFTQI DVEMSFVDQD
DVIALGEALV GRIWKETIGY ELPTPLPRMT YWDAMSRYGS DKPDLRFGQE LVEMTEYFAD
TTFRVFQAPY VGAVVMPGGA SQSRKELDGW QDWAKSRGAR GLAYVLVGED GALGGPVAKN
LSETEAAGLA AKTGAKPGDA IFFAAGTAAA SRDLLGAARL EIGRRCGLID ESAWNFLWIV
DAPMFEEDGE GGWTAVHHPF TGPKPEWADN FQDHPGEALA YAYDMVCNGM EIGGGSIRIH
RAEMQQRVFD VLGISKEEAE NKFGFLLEAF KYGPPPHGGI AYGWDRICML LAGGDSIRDV
IAFPKTASGF DPLTGAPTPI TGEQRKEAGV DAKPKAEA
|
|---|
| |