Gene Sros_6058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6058 
Symbol 
ID8669352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6640205 
End bp6641023 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content74% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003341534 
Protein GI271967338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC GGACGCGCCT CGACAGCGAG CTCGTGCGCC GGAAACTGGC CCGGTCCCGG 
GAGCAGGCGG CCCAGCTCAT CGAGGCGGGC CGGGTCAGCG TCGGCGGCCA GTTGGCAGCC
AAGCCCGCGA CCCAGGTGGA CACCGCCTCC GCCATCGTGG TCGCCGAGGC CGCCGAAGGC
CCCGACTACG TCTCGCGGGG GGCGCACAAA CTTCTCGGCG CCCTGGAGGC CTTCGGCCCC
CGGGGGCTGA CCGTCGCGGG ACGGCGCTGC CTGGACGCGG GGGCCTCGAC GGGAGGCTTC
ACCGACGTGC TGCTGCGCAA CGACGCGGCG CACGTGCTCG CCGTCGACGT CGGGTACGGC
CAGCTCGCCT GGTCGCTGCG GACCGACGAG CGCGTCACGG TCATGGAGCG GGTCAACGTC
AGGGACCTGA CACCCGACAT GGTGGGCGAG CCTCCCACGC TGATCGTCGG TGACCTGTCC
TTCATCTCGC TGCGCCTGGT GCTGCCCGCC CTGACGCTGT GCGCCGCCGA GCGGGCCGAC
TTCGCGATGC TGGTCAAGCC GCAGTTCGAG GTCGGCAAGG AGCGGGTCGG CGCCGGCGGG
GTCGTGCGTG ACCCCGTCCT GCGGGCGCAG GCCGTACGGG ACGTCGCCGG GGCCGCGCAG
GCGCTCGGCC TCACCGTGCG GGGCGTCACC GCGAGCCCGT TGCCGGGCCC GTCGGGAAAC
GTGGAGTACG TCATCTGGCT CGGCAAGGGA GAAGGCGCGC TCCCGGTGGC GGACATCGGC
GCCGAGGTCG AACGCGCGGT GGCAGAAGGC CCTCAGTAG
 
Protein sequence
MSRRTRLDSE LVRRKLARSR EQAAQLIEAG RVSVGGQLAA KPATQVDTAS AIVVAEAAEG 
PDYVSRGAHK LLGALEAFGP RGLTVAGRRC LDAGASTGGF TDVLLRNDAA HVLAVDVGYG
QLAWSLRTDE RVTVMERVNV RDLTPDMVGE PPTLIVGDLS FISLRLVLPA LTLCAAERAD
FAMLVKPQFE VGKERVGAGG VVRDPVLRAQ AVRDVAGAAQ ALGLTVRGVT ASPLPGPSGN
VEYVIWLGKG EGALPVADIG AEVERAVAEG PQ