| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6052 |
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| Symbol | |
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| ID | 8669346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 6632660 |
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| End bp | 6634309 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | membrane protein putative virulence factor-like protein |
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| Protein accession | YP_003341528 |
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| Protein GI | 271967332 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.612093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA AGATCGGGCA GGGGGTCGCC GGGGCGGCAC TCCTCATCGG GATCGTGACC
GTCGCGGCCC GGCTCGTCGG GTTCGGCCGC TATCTCGTCC AGTCCCAGAC CGTCGGCAAC
CTCTGCCTGA GCACCGCCTA CAACACCGCC AACTACGTCC CCAACATCGT CTTCGAGCTG
GTGGCCGGGG GCGCGCTGGC CGGGATGGTG GTGCCGGTGC TGGCCTCGGC GGCCTCCCGG
GCGGGAGAGG ACCCCGAGGC CAGGGCGGAG GTCGGCTGGA CCACCTCCGC CCTGCTCACC
TGGGTGATGC TCGCGCTGGT GCCGCTGACC CTGCTCATCG CCGCGTTCGC CGGGCCGATC
GTCACGCTGC TGACCGGCAA TCCCGGCGAG TGCGACGTGG CCGAGGTCGT CAGGGCCGGC
ACGGACATGC TCGTCGTGTT CGCCCCGCGC ATGATCTTCT TCGGCGTCGC GGTGGTCCTG
TACGGCGTGC TCCAGGCCCA CCGGCGGTTC ATGGGGCCCG CCCTGGCGCC GCTGGTCTCC
AGCCTGCTCA TCGTCGCCTC CTACCTGGTG TTCGAGCCGG TCGGCAACGG GGCCGCCGCC
GACCTGTCGA ACCTCACGAC GGCGGGGCAG CTGACGCTCT CGCTCGGCGC GACGATCGCC
GCCGCGGCGA TGGTGCTCAC CGTGGCCGGC CCGGTGGGCC GCCTCAAGCT GCGGCTGCGG
CCCTCGCTGT CGTTCCCCCC GGGGGTCGCC GCCCGCGCGC GGCAGCTCGC CGTCGCGGGC
ATCGCCGTGC TCATCGCCCA GCAGGTCGCG CTGACCGTCG TGGTCCGCCT GGCCAACGAC
CTGGGCGGCG CGGGGGCGAC GGGGATCTAC ACCTACTCCT GGGCGCTGTA CCAGCTCCCC
TTCGCGGTGC TCGTGGTGCC GATCGCCACC AGCTCGTTCC CGGTGCTGTC GGCCCGGGCG
GCCGACGGGG ACCGGGCCGG TTTCGACAGC CTGGCCTCGT CCAGCACGAG GGTGATCCTG
CTGGTGACAG GGCTGGCGGC CGGGGTGATG GCGGCGGTCG CCATGCCCGT GTCCCGGGTG
TTCGTGGAGG GCACGCCGGG CGGCGATCCC CGGGAGATGG CCGGGGCCGT CGCGCTGTTC
GCGCCGGGTC TGGTGGGATA CGCGCTGATG CTCCATCTCG CGAGGATTCT GTACGCCTGT
GGCCGGGGCC GGTCGGCGGC GGTCGCCTCG GTGGCCGGAT GGGCCGTCGC GCTGGTGGCG
CAGATCCTGC TGGCCCAGGC CGCGCACGGC CCGTCCGACG TCGTGGGGCA GCTGGCGCTG
GGCAGCACCG TCGGCATGAC CGTCGGCGGA GGGCTGCTGG CGCTCGCGGT GTCCAGGGCC
GCGGGCACGG CCGCGCTGGA GGGGGCCTGG CGGGCCCTGT CCGCCGGGCT GCTCGGCGGG
GTGGCCGCCT ACGGGGCCGG TCTGGCCGTG GTCACGGTCT CCGGCGAGGT GTCACGGTGG
ATGTGCGTGG TGGTCGGAGC GGCGGCGGCG GTCGCCGGCT CGGCGGTGTT CGCGGCCGTG
GCCGCGGTGA TCGACAGACC GGATACCCGG CTGCTGCTGG AACGGCTCAG ACGGATGTCC
ACTCCAGGAG GGAACCGTGG CGATGACTGA
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| Protein sequence | MIKKIGQGVA GAALLIGIVT VAARLVGFGR YLVQSQTVGN LCLSTAYNTA NYVPNIVFEL
VAGGALAGMV VPVLASAASR AGEDPEARAE VGWTTSALLT WVMLALVPLT LLIAAFAGPI
VTLLTGNPGE CDVAEVVRAG TDMLVVFAPR MIFFGVAVVL YGVLQAHRRF MGPALAPLVS
SLLIVASYLV FEPVGNGAAA DLSNLTTAGQ LTLSLGATIA AAAMVLTVAG PVGRLKLRLR
PSLSFPPGVA ARARQLAVAG IAVLIAQQVA LTVVVRLAND LGGAGATGIY TYSWALYQLP
FAVLVVPIAT SSFPVLSARA ADGDRAGFDS LASSSTRVIL LVTGLAAGVM AAVAMPVSRV
FVEGTPGGDP REMAGAVALF APGLVGYALM LHLARILYAC GRGRSAAVAS VAGWAVALVA
QILLAQAAHG PSDVVGQLAL GSTVGMTVGG GLLALAVSRA AGTAALEGAW RALSAGLLGG
VAAYGAGLAV VTVSGEVSRW MCVVVGAAAA VAGSAVFAAV AAVIDRPDTR LLLERLRRMS
TPGGNRGDD
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