Gene Sros_6050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6050 
Symbol 
ID8669344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6630348 
End bp6631340 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID 
Productintegral membrane protein TerC 
Protein accessionYP_003341526 
Protein GI271967330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.022574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTTC CACTCTGGGC ATGGATCGCC GTTATCGGCG GTCTTCTCGT CGTCCTTGCC 
TTTGATCTGT GGATCGTCGA CCGGGGCGAG CCTCGAGAGT TCTCCATGAA GCAGGCCGGT
TACTGGGTCG CCTTCTATGT CGCCCTCGCG GTCGTTTTCG GCATCGTGCT GTGGATCTTC
GCCGGGCCGA CCCCGGCGGG CCAGTTCTTC GCCGGCTACA TCACCGAGTA CAGCCTGAGC
GTCGACAACC TTTTCGTCTT CTACATCATC ATGACCCGCT TCGCGGTGCC CAAGATCCAT
CAGCACAAGG TGCTGCTGGT CGGCATCCTG ATGGCGCTGG TCATGCGGGG CATCTTCATC
GCCGTCGGCG CCGCCGCGCT GGCGAGCTTC GGGTGGCTGT TCTACGTCTT CGGCCTGTTC
CTGATCTACA CCGCGGTGCA GCTGATCCGC CAGCACGGTC ACGACGACGA CGACGTCCCG
GAGAACGCGG TCCTGCGCTG GGCGCGCCGG GCGCTGCCGC ACACCGACGA CTACGTGGGC
TCCAAGGTCG TCGTCAAGGT CGACGGCAAG CGGATGGTCA CCCCGCTGCT GATCGTGATG
ATCGCGATCG GCACCACCGA CCTGCTGTTC GCGCTCGACT CGATTCCCGC GATCTTCGGT
CTCACCACCG ACGCCTTCAT CGTCTTCAGC GCCAACGCGT TCGCCCTGAT GGGGCTGCGT
CAGCTCTACT TCCTGCTGGG CGGTCTGCTG CAGCGCCTGG TCTACCTGAG CTACGGTCTC
GCGTTCATCC TTGGTTTTAT CGGGGTTAAG CTGATTCTTG AGGCGCTGCA CTCCAGTGGC
GTGTCCTGGG CACCCGAGGT GCCGATCTGG CTGTCGTTGT CGGTCATCGG CGTCACCATG
GTGATCACCA CTGCGGCCAG CCTGATCAAG GCCCGTCGCG ACGGACGCGA AAGCAAGGAA
ATCACCACCT CCGCGAGTGG TAAGCAGGGC TAG
 
Protein sequence
MTVPLWAWIA VIGGLLVVLA FDLWIVDRGE PREFSMKQAG YWVAFYVALA VVFGIVLWIF 
AGPTPAGQFF AGYITEYSLS VDNLFVFYII MTRFAVPKIH QHKVLLVGIL MALVMRGIFI
AVGAAALASF GWLFYVFGLF LIYTAVQLIR QHGHDDDDVP ENAVLRWARR ALPHTDDYVG
SKVVVKVDGK RMVTPLLIVM IAIGTTDLLF ALDSIPAIFG LTTDAFIVFS ANAFALMGLR
QLYFLLGGLL QRLVYLSYGL AFILGFIGVK LILEALHSSG VSWAPEVPIW LSLSVIGVTM
VITTAASLIK ARRDGRESKE ITTSASGKQG