Gene Sros_6014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6014 
Symbol 
ID8669308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6590702 
End bp6591805 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID 
ProductTransaldolase 
Protein accessionYP_003341491 
Protein GI271967295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.05295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.727575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TCCTGAAGAG CCTTTCCGGG CACGGCGTGT CGATCTGGCT GGACGACATC 
AGCCGCGAGC GCCTGCGCAC CGGCAACCTG GAGTCGCTGA TCCGCGAGAA GTACGTGGTC
GGCGTCACCT CCAACCCGAC GATCTTCGCC TCGGCGCTGA GCAAGGGCGA CGCCTACGAC
ACCCAGCTCC ACGACCTGGC CGTGCGCGGC GTGGACGTCG AGGAGGCGGT GCGCGCCATC
ACCACCTACG ACATCCGCTG GGCCGCCGAC GTGCTCAGGC CGGTCTACGA CGCCACCGAC
GGCGTGGACG GCCGGGTCTC GATCGAGGTG GACCCGCGCC TGGCCAGGGA GACCGACAAG
ACCGTCGCCG AAGCGCGCGC GCTGTGGTGG ATGGTCGACC GGCCCAACCT GTTCATCAAG
ATCCCTGCCA CGGTCGAGGG CCTGCCCGCG ATCACCCAGG CGATCTCCGA GGGCATCAGC
GTCAACGTCA CGCTGATCTT CTCCCTCGAG CGCTACCGCG CCGTGATGGA CGCCTGGCTG
ACGGGCCTGG AGCGCGCGCA GGCCAACGGC CTGAACCTGG CCGGCATCGA GTCGGTGGCC
TCCTTCTTCG TCAGCCGCGT CGACAGCGAG ATCGACAAGC GTCTGGAGAA GATCGGCACT
CCCGAGGCCA AGGCCCTCAA GGGCAAGGCG GCGGTCGCCA ACGCCCGCCT CGCCTACGCC
GCCTTCGAGG ACGTGGTCAA CTCCCCGCGC TGGCAGGCGC TGGCCGCCGC CGGAGCCCAC
CCGCAGCGCC CGCTGTGGGC CTCCACCGGC ACCAAGGACC CGAGCTACCC CGACACCCTC
TACGTCGACG AGCTCGTGAC GGCGGGCACG GTCAACACCA TGCCGGAGAA GACCCTCGAC
GCCGAGGCCG ACCACGGCCG GATCACCGGC GACACCATCC GCTCCTTCTA CGAGGACGCC
TGGAACACCA TGGCCGCGCT CAAGGAGGCC GGCATCGACT ACGACGACGT GGTGAGGGTG
CTGGAGGAGG AGGGCGTGGA GAAGTTCGAA GCGTCCTGGA AAGAGCTCCT GGCCACCGTC
TCCGCCGAGC TGCGGAAGGC GTGA
 
Protein sequence
MSEILKSLSG HGVSIWLDDI SRERLRTGNL ESLIREKYVV GVTSNPTIFA SALSKGDAYD 
TQLHDLAVRG VDVEEAVRAI TTYDIRWAAD VLRPVYDATD GVDGRVSIEV DPRLARETDK
TVAEARALWW MVDRPNLFIK IPATVEGLPA ITQAISEGIS VNVTLIFSLE RYRAVMDAWL
TGLERAQANG LNLAGIESVA SFFVSRVDSE IDKRLEKIGT PEAKALKGKA AVANARLAYA
AFEDVVNSPR WQALAAAGAH PQRPLWASTG TKDPSYPDTL YVDELVTAGT VNTMPEKTLD
AEADHGRITG DTIRSFYEDA WNTMAALKEA GIDYDDVVRV LEEEGVEKFE ASWKELLATV
SAELRKA