Gene Sros_6013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6013 
Symbol 
ID8669307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6588528 
End bp6590699 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content71% 
IMG OID 
ProductTkt1 
Protein accessionYP_003341490 
Protein GI271967294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0469942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.474282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGGA AATGCCAAAC CGGCGCCACC ATCACACGAC TAGATCCGGA GATCGAGCAC 
TTGAGCAGCG AACTCGTGCC AGCCCTTGAA TGGAGCGACC TGGACCGTCA GGCGGTCGAC
GTCGTACGGG CCCTGGCGAT GGACGCGGTA GAGAAGGCGG GGTCGGGTCA CCCCGGCACC
GCGATGAGCC TCGCGCCCGC CGCGTACCTG CTTTTCCAGC AGACGTTGCG GCACGACCCG
TCGGACCCCA CATGGGCGGG TCGGGATCGA TTTGTCCTTT CCGCCGGTCA CACCAGCCTG
ACCCTGTACA TCCAGCTGTA CCTGTCGGGC TACGGCCTGT CCCTGGACGA CCTCAAGGCC
CTGCGCCAGT GGGACAGCCT GACCCCGGGC CACCCCGAGC ACGGCCACAC CATCGGTGTC
GAGACCACCA CCGGCCCGCT CGGCCAGGGT CTCGGCAACG CCGTCGGCAT GGCCATGGCC
GCCCGCCGCG AGCGCGGGCT GTTCGACCCG GACGCGGCGC CGGGCGCCAG CCCCTTCGAC
CACATGATCT GGTGCATCGC CTCCGAGGGT GACATCGAGG AGGGCGTCAG CCACGAGGTC
AGCGCCATCG CCGGCCACCA GAAGCTGGGC AACCTGGTCG TCGTCTTCGA CAGCAACCAC
ATCTCCATCG AGGACGACAC CCAGATCGCG CTGAGCGAGG ACATCGCCAA GCGCTACGAG
GCGTACGGCT GGCACGTCCA GACCGTCGAC TGGACCAAGG ACGGCGACTA CACCGAGGAC
GTCGAGGCGC TGCACCAGGC CCTGGAGGCC GCCCGCGCCG AGACCGACCG GCCGTCGTTC
ATCCGCCTGC GCACCATCAT CGGCTGGCCG GCGCCGAACA AGCAGAACAC CGGCAAGGCC
CACGGCTCGG CCCTGGGCGC CGAGGAGATC GCCGCCACCA AGACCGTCAT GGGGCAGGAC
CCTGCCAAGA GCTTCGACGT CCCGGCCGAG GTCCTGGAGC ACGCCCGCGA GGTCGTCGAG
CGCGGCCGGG CCGCCCACGC CGAGTGGGAG AAGGCCTACC AGAGCTGGCG GTCGGCCAAC
CCCGAGCGCG CCGCCGAGTT CGACCGGATC AGCGTGCGGC AGCTGCCGAC CGGCTGGACC
GAGGCGCTGC CGGTCTTCGA GACCGGCGCC TCCATCGCCA CCCGCAAGGC CTCCGGCGAG
GTGCTCAACA GCCTCGCGCC CGTGCTGCCC GAGCTGTGGG GCGGCTCGGC CGACCTGGCC
GAGTCCAACA ACACCACGAT GAAGGGCGAG CCGTCCTTCA TCCCCGAGGA GTACCAGACC
AAGGAGTTCC CCGGGAACCG CTACGGCCGG ACGCTGCACT TCGGCATCCG CGAGCACGGC
ATGGGGTCCA TCCTCAACGG CATCGCCCTG CACAACGGCA CCCGCCCCTA CGGCGGCACG
TTCCTGGTCT TCAGCGACTA CATGCGCCCG GCCGTACGGC TCGCGGCGCT GATGAAGCTG
CCGGTCACCT ACGTGTGGAC CCACGACTCC ATCGGCCTGG GCGAGGACGG CCCGACCCAC
CAGCCGGTCG AGCACCTGTG GGCGCTGCGC GCCATCCCGG GCCTGGACGT CGTCCGCCCG
GCCGACGCCA ACGAGACGGC CGCGGCGTGG CGGACCGTGC TGGAGCACGG CGACCGCCCC
GCCGCGCTCG CGCTGACCCG GCAGAACCTC CCGGTCTACG CCGGCACCGC CGACGCCGGG
AAGGTCGCCC GGGGCGCCTA CGTCCTGGAG GAGGCCTCCA ACGGCCAGCC CGCGGTGGTC
CTGATCGGCA CCGGCTCCGA GGTCGAGCTG GCCGTGCAGG CCCGTGAGCT GCTGGAAGCC
GAGGGCATCC CGGCCCGGGT CGTGTCGATG CCGTGCGTGG AGTGGTTCCA GGCCCAGGAC
TCGGCCTACA AGCAGACGGT GCTGCCCCCC GCGGTCCGCG CGCGCGTCGC CGTCGAAGCG
GGAATCGCGC TGGGCTGGCG GGAGTTCGTG GGAGACGAAG GGGAAGTGGT GAGCCTGGAG
CACTTCGGTG CCTCGGCCCC CTACAAGACC CTTTACGAGC AGTTCGGCCT CACCGCCGAG
CGAGTGGCTG CCGCCGCCAA GGCCAGCCTC GCGCGGACCG GGGCCGACAA GGGCGAGACG
ACAGGAAACT GA
 
Protein sequence
MGGKCQTGAT ITRLDPEIEH LSSELVPALE WSDLDRQAVD VVRALAMDAV EKAGSGHPGT 
AMSLAPAAYL LFQQTLRHDP SDPTWAGRDR FVLSAGHTSL TLYIQLYLSG YGLSLDDLKA
LRQWDSLTPG HPEHGHTIGV ETTTGPLGQG LGNAVGMAMA ARRERGLFDP DAAPGASPFD
HMIWCIASEG DIEEGVSHEV SAIAGHQKLG NLVVVFDSNH ISIEDDTQIA LSEDIAKRYE
AYGWHVQTVD WTKDGDYTED VEALHQALEA ARAETDRPSF IRLRTIIGWP APNKQNTGKA
HGSALGAEEI AATKTVMGQD PAKSFDVPAE VLEHAREVVE RGRAAHAEWE KAYQSWRSAN
PERAAEFDRI SVRQLPTGWT EALPVFETGA SIATRKASGE VLNSLAPVLP ELWGGSADLA
ESNNTTMKGE PSFIPEEYQT KEFPGNRYGR TLHFGIREHG MGSILNGIAL HNGTRPYGGT
FLVFSDYMRP AVRLAALMKL PVTYVWTHDS IGLGEDGPTH QPVEHLWALR AIPGLDVVRP
ADANETAAAW RTVLEHGDRP AALALTRQNL PVYAGTADAG KVARGAYVLE EASNGQPAVV
LIGTGSEVEL AVQARELLEA EGIPARVVSM PCVEWFQAQD SAYKQTVLPP AVRARVAVEA
GIALGWREFV GDEGEVVSLE HFGASAPYKT LYEQFGLTAE RVAAAAKASL ARTGADKGET
TGN