Gene Sros_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6001 
Symbol 
ID8669295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6575558 
End bp6576451 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003341478 
Protein GI271967282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.506742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0244334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC TCGTCTGGAA CGGCCTGTTT GTCGGCTCGT TCTACGCGCT GGTGGCGCTG 
GGCTACAGCA TGGTCTACGG GATCATCAAG CTGCTCAACT TCGCCCACGG CGACCTGTAC
ATGCTCGGCG CGTTCGTCGG CTTCGCCATC CTCGGCGCGG TCGGCGGCGT GTCCTCCTCG
ATGGCGCTGC CGCTGCTGCT GGTGGTACTC CTGGCGACCA TGGTCCTCAC CGGCCTGGCC
GGGGTGGCAC TGGAACGGAT CGCCTACCGG CCGCTGCGCC GCGCGCCCCG GCTCTCCCTG
CTCATCACCG CGGTCGGCGC GTCCTTCGCC CTGGAGTACG GCATGCGCGC CGCCGCCGGG
GCCGACCCGC GGGTCTACCC GGTACGGCTC GGCGGCACCT CCGTGGAGGT GCTCGGAGCC
CGGCTGACCC TGCAGCAGCT CGTCCTGGTC GGAGTGGCCG TCGTCCTCAT GATCGGGCTC
AACCTGCTGA TCACCCGGAC CCGTGAGGGC CGGGCCATGC GGGCCATCGC CCTCGACCCG
CGCACCAGCT CGCTGATGGG CATCGACGTG AACGCGGTCA TCTCCCGGAC CTTCTTCATC
GGCTCGGCCC TCGCCGGGGC CGCCGGGGTG ATGGCGGGGG CCTACTACGG GAAGATCGAC
TTCCTGATGG GCTTCCTGAT CGGGCTCAAG GCCTTCACCG CGGCCGTCAT CGGCGGCATC
GGCAACATCC CCGGCACGAT GCTCGGCGGG CTGCTGCTCG GGCTGCTGGA GTCGTTCGGC
ACGTTCTGGC TGGGCGGCGA GTGGCGCGAC GTGTTCGCCT TCGGGGTGCT GATCCTGTTC
CTGACCGTGC GGCCCACGGG CCTGCTCGGC GAACGCGTGA CGGAGCGAGT ATGA
 
Protein sequence
MTQLVWNGLF VGSFYALVAL GYSMVYGIIK LLNFAHGDLY MLGAFVGFAI LGAVGGVSSS 
MALPLLLVVL LATMVLTGLA GVALERIAYR PLRRAPRLSL LITAVGASFA LEYGMRAAAG
ADPRVYPVRL GGTSVEVLGA RLTLQQLVLV GVAVVLMIGL NLLITRTREG RAMRAIALDP
RTSSLMGIDV NAVISRTFFI GSALAGAAGV MAGAYYGKID FLMGFLIGLK AFTAAVIGGI
GNIPGTMLGG LLLGLLESFG TFWLGGEWRD VFAFGVLILF LTVRPTGLLG ERVTERV