| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5995 |
|---|
| Symbol | |
|---|
| ID | 8669289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6570492 |
|---|
| End bp | 6571172 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_003341472 |
|---|
| Protein GI | 271967276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.261436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0901138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCTT CGGCGGAGGA CCGGCTCGAC CTGCCGGTCG TGGGCGAGCG GCAGAGCCTG
CGGGAGCAGG TGGCCCACGC GCTGCGGGCC GCCCTGATCA CCGGGGAGAT GCGGCCGGGG
GTGGTCTACT CGGCGCCGGT GCTGGCCGCC CAGTTCGGCG TCTCGGCGAC GCCGGTGCGC
GAGGCGATGC TCGACCTGGC CAAGGAGGGC CTGGTCGAGG CGGTGCGCAA CAAGGGCTTC
CGGGTCACCG AGCTGTCCGA CCGCGACCTG GACGAGCTCA CCGAGATCCG CCGGCTCATC
GAGGTGCCCA CGGTGGCGCG GCTGGCCGAC CGGGCCCGTG CGGAGAGCTT CGAGCTGCTC
CGCCCGGTGG CCCAGCAGAT CGTCGACGCG GCCGAGCGCG GCGACCTGCT CGCCTACGTG
GACGCCGACA TCCGCTTCCA CGTGGAGCTC CTCGCCCTGG CGGGCAACGC GCACCTGGTG
GAGGTGGTGC GCGACCTGCG TAAGCGGGCC CGCCTGTACG GCCTGTCGGC GCTGTCCGCG
CGCGGTGGAC TGGTCGACTC CGCCCGAGAG CACCTCGACC TGCTCGACCT GCTCTCCGCG
GGAGACGCCG GCGGTTCCGA GCGGCTGATG CGCAACCACA TCCAGCATGT GCGGGGCATC
TGGGCCAGCA AGCCGGAGTA G
|
|---|
| Protein sequence | MAPSAEDRLD LPVVGERQSL REQVAHALRA ALITGEMRPG VVYSAPVLAA QFGVSATPVR
EAMLDLAKEG LVEAVRNKGF RVTELSDRDL DELTEIRRLI EVPTVARLAD RARAESFELL
RPVAQQIVDA AERGDLLAYV DADIRFHVEL LALAGNAHLV EVVRDLRKRA RLYGLSALSA
RGGLVDSARE HLDLLDLLSA GDAGGSERLM RNHIQHVRGI WASKPE
|
|---|
| |