Gene Sros_5986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5986 
Symbol 
ID8669280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6560381 
End bp6561499 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID 
ProductFeS assembly protein SufD 
Protein accessionYP_003341463 
Protein GI271967267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.207884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.24257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCG AAACCAAACC CCTGTCGACC CTCCACGAGA AGGCCTCCTA CAACGTGGAG 
GACTTCCCGG TCCCGACCGG CCGCGAGGAG GAGTGGCGCT TCACCCCGCT GTCGCGCCTG
AAGGGCCTGC ACAGCGGCGC CGCCCCGGCC GGCGGCGTGC TGATCCACGT CGACGCGGCC
CCCGAGGTCA CGGTGGAGAC CGTGGGCCGC GACGACCAGC GGCTCGGCAA GGCCTACGTG
CCCGCCGACC GGGTCAGCGC CCAGGCCTTC GCCGTCTTCG AGAAGGCCAC CGTCCTGACG
GTCCCGCGCG AGGCGGTCGC CTCCAAGCCG ACGGTGATCA CGCTCACCGG CTCCGGCGAG
GGCGCCGCCT ACGGCCACAT CCTGGTCACG CTGGAGCCGA TGGCCGAGGC CGTCCTCGTC
CTGGACCACC AGGGCAGCGC GGTCTACGCC GACAACGTCG AGTTCGTCGT GGGCGAGGGC
GCCACGCTCA AGGTCATCAG CCTGCAGGAC TGGGCCGACG ACGCCGTGCA CGTCTCCCAC
CACCACGCCC TGCTCGGCAA GGACGCGACC TTCCGCAGCT TCGTGGTCAC CCTCGGCGGC
GACCTGGTAC GGCTGTCGCC GTCGGTCTCC TACAGCGGCC CCGGCGGCGA CGCCGACCTG
ACCGGCCTCT ACTTCGTGGA CGCCGGGCAG CACATGGAGC ACCGCCTGCT GGTGGACCAC
TCCCAGCCCA ACTGCAAGAG CAACGTCGTC TACAAGGGCG CGCTGCAGGG TGAGGACGCC
CACGCCGTCT GGATCGGCGA CGTCATCATC CGGGTCGAGG CCGAGGGCAC CGACACCTAC
GAGCTCAACC GCAACCTCCT GCTCACCGAC GGCGCCCGCG CCGACTCGGT GCCGAACCTG
GAGATCCTCA CCGGCGAGGT CGCCGGAGCG GGGCACGCGA GCGCCTCGGG CCGCCTGGAC
GACGAGCACA TCTTCTACCT CCAGGCCCGC GGCATCCCGT TCGACGACGC GCGCCGCCTG
GTCATCCGGG GCTTCTTCGC GCAGCTGCTG GAGAAGATCG AGCTCCCCGA GCTGCGTGAG
CGGGTGCTCG GCAAGGTTGA GGCGGAGCTC GAGAAGTGA
 
Protein sequence
MGLETKPLST LHEKASYNVE DFPVPTGREE EWRFTPLSRL KGLHSGAAPA GGVLIHVDAA 
PEVTVETVGR DDQRLGKAYV PADRVSAQAF AVFEKATVLT VPREAVASKP TVITLTGSGE
GAAYGHILVT LEPMAEAVLV LDHQGSAVYA DNVEFVVGEG ATLKVISLQD WADDAVHVSH
HHALLGKDAT FRSFVVTLGG DLVRLSPSVS YSGPGGDADL TGLYFVDAGQ HMEHRLLVDH
SQPNCKSNVV YKGALQGEDA HAVWIGDVII RVEAEGTDTY ELNRNLLLTD GARADSVPNL
EILTGEVAGA GHASASGRLD DEHIFYLQAR GIPFDDARRL VIRGFFAQLL EKIELPELRE
RVLGKVEAEL EK