Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5968 |
Symbol | |
ID | 8669262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6543901 |
End bp | 6544782 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003341446 |
Protein GI | 271967250 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.258311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.142428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACCTC CGACCCACAT CCTCGTGGTC AACGGGATCA AGGTCCGCCA GCCGGTGTTC GTGCTCTCCG CCCCTCACTC CGGCGCGGAT CTGCTTGCCC GTGCCCTGAA GCGTTCCCCC GGCTTCCACG TCACGATGGG GCGTCCCTCG GTGGCCCACG TCGTGTACGC CTTCGCCCGG CGCCCGTCCA TCGCCGGCCG GGGCATGGGC GCCACCCGCG TGCTCCGCGA CGCCCTGGCC GAGGCCTGGC AGATCGTCCC GGGCGCGTGC CTCGACTGCC CGGCGGCGTG CCGGGAGGCG GGAGGCGTGA CCGGGGAGGG CCCGTGCGCG GCCCCGGGCG CGGTGGCCCG GTTCGGCGAC GCCAGTCCCG ACCTGCTCTA CAGCGCCTCG GTGCTGCTGC AGGCCTTCCC CGACGCCCGG TTCGTCCAGC TCATCAGGGA CGGCCGCGAC GTGGCCGCCG ACATGCTGGC CGATCCGGCG GCCCTGTCGT GGTTCAAGCC GGTCATGCTG AGCGACGAGA CGGAGTTCCC CAACCCGTTC CTCGGCGTCA ACTCCGGAGA GCACCGCGAC CGCTGGAAGG CGATGCCCAC GGCCGGCAAG TGCGCGCTGC GCTGGCGCAG CGCGGTCCGG CTGTCGGCCA CCCTGCGCCA GGAGCTCCCC CGCGAGCAGC TGCTGACCCT GCGCTACGAG GACCTGGTCT CCTCCCCCGC CGAGACGGTG GAGGGACTGT CGGCCTTCCT GGAGACGCGG GTCTCCAAGG TCGCCCTGTA CGGCGGGAGC GCGCCGAAGG TGGGTGCCTG GCGCACCCGG CTGCGGGGCC AGGACGCCGA GCTGGTGGAG AAGGTGGCCC GCGAGGAGCT CAGCCGCCTG GGCTACCAGT GA
|
Protein sequence | MRPPTHILVV NGIKVRQPVF VLSAPHSGAD LLARALKRSP GFHVTMGRPS VAHVVYAFAR RPSIAGRGMG ATRVLRDALA EAWQIVPGAC LDCPAACREA GGVTGEGPCA APGAVARFGD ASPDLLYSAS VLLQAFPDAR FVQLIRDGRD VAADMLADPA ALSWFKPVML SDETEFPNPF LGVNSGEHRD RWKAMPTAGK CALRWRSAVR LSATLRQELP REQLLTLRYE DLVSSPAETV EGLSAFLETR VSKVALYGGS APKVGAWRTR LRGQDAELVE KVAREELSRL GYQ
|
| |