| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5965 |
|---|
| Symbol | |
|---|
| ID | 8669259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6539133 |
|---|
| End bp | 6541718 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Molecular chaperone-like protein |
|---|
| Protein accession | YP_003341443 |
|---|
| Protein GI | 271967247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000466156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.324248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGT GGTGCCTCGG TGTCGATCTC GGGACGAGCT TCTCCGCCGG GGTGATAGCC
GCCGAAGGAC GCTTCGACAT CCTGGAGGTC GAGGGGGAAC GGCGCATTCC CTCCGCCGTC
ATGCTCGACG AGCACGGAAC TCTGGTGGCA GGCCGGATCG CCCAGCGGGG GATCGCGATC
AGCCCCGAAC GCGTCGAGCG CAACCCCAAG CGCTACGTCG GCCGCGGCCG GATGCTGCTC
GGCGGGGTCC CGGTGGACGT GACCGACGCC ATGGCGGCTC TGCTTGAGCT GTTCGTGACC
GAGGGGCGGC GGCGGTTCGA CGGTGCGGCC CCCGAGTGCG TCGCGCTGAC CCACCCGGTG
GCCTGGGGCG CGGACCGCAA GGCCGTGCTC CTGGCGGCGG CCAGGAAGGT CGTGCGCGGC
GTGCGGATCG TGCTCATCGA CGAGCCCGTG GCCTCGGCCC GCTACTTCGC CTCCGCCGGG
AGGGCGGCGG GCGGATCGCA CCTGGCCGTC TACGACCTCG GCGGCGGCAC GTTCGACGCC
GCCGTGCTCA GCGTGGACGG CGGCGACTTC AGCGTCCTGG GGGAGCCGGG CGGCAGCGAC
GAGATCGGCG GTGAGGGGTT CGACGAGCAG GTCTTCGCCT TCCTCGGCGC CCAGATCGAG
CGCCTCGACC CCGAATGGTG GCAGCAGGTG ACCACGAGCC CGGAGCGGCG CTACGTGAGC
TACGCCGCCG ACCTGCTCAA GATGGCCAGG GAGGCGAAGG AGTCGCTGTC GAAGTTCGAT
ACCTCCTCCC ACTACGTGGT CGGCATCAAC GAGGACGTGC ACATCAGCAG GACCGACCTG
GAGGACCTCA TCGGAGGGGA GATCGTCAGG ACGGTCGACA TCCTGGACGA GACGATCCGG
GGCTCCGGGA TCCGGGAGGA GGAGCTGGGC GCGGTGTTCA TGACCGGTGG GGCCAGCCGG
ATGCCGCTGG TCCAGAAGGT CGTGCGCGAG CGCCTCGGGG ACCGGGTGCG GACCTACGAC
GACCCGAAGA TCGTCGTCGC CTACGGCGCC GCGCAGCTCG CCTGGAAGCT CAAGGTCGAG
CACCGCGACC CCGCCCGGAG CACCGGTCCG GCGACGGGCG CGGCGGCCGG GACGGCGCAG
GCCGTCACCG GCCCGCACGC CGGTCCGCGG ACCGGCCCGA CCGGAGGTCA TCGGGTGCCG
GCCGGTACGG CGGGCGGGCA CCAGGTATTC ACGGGCCCGG CCGCGGGTGC CGGGAGCCCC
ACCGGGCCCG CGAACGCCGG TGGCCCGGCG GGCGCGCCCA CCGGAGGTCA CGCGGTCGTC
CCCGCCGGGA CGGGCGCCCC CACCGACGGT CCCACGGTCA AGGGGATCGA GAAGGTGCTG
GACGGCGTGC TGGAGGCGCG CGCCGAGGCG GGCCGGGTCT TCGTCCACCA GGCCTTCGAC
AGCGGTCACC TCCTGCGCAG GCTCGACGGG ATCGAGGGCC GCCACGACCG CGAGCTCGGC
TTCGGCAGGC TGGTGGAGTG GGCCGCCTCG CGCGAGGGCG TCGTGGCGGT GGAGCAGGTC
GGCCCGGCAC AGGTGCTGGT CCGCACGCTC AGCTCCGATC TGGCCATCCG CGCCACCCAT
CCGCTGCAGA TGTGGGGCGA TCCCACCGTG ATCGCCCACG GCCGTACGGC ATGGGTCTTC
TTCCAGCCCC GGCAGACCGT CGCGGTCGAC ACCACGGTGG GCCTGCCCTG GGGGGAGACC
GGGCACCTGG CGATGATCGA GCTCGACCTG GGCGGTGGAT TCTTCTTCCA GGCACCCCCG
ACCCGCGACC TGGGCCCGTA CGCCCGGTGG TTCGTGAACG AGGACAACAG GCTGCGCCGC
CTGCTCGACC AGGAGGGGCC CAGCGGCACC GAGCCGTCGC CCTCCGTGGG CGCGCCGGGC
TGCACGGTGG TCCTCGGGCA GTTCAGCAGC AACAAGCCGA TATTCCAGAA CCGGCACCAG
GACTTCAGGC CGTGGCAGGT GCTGTGCCTG GTCGATCCCG GCGGCGCCGT GCGCCCCACG
GTGCGGGAGC CGGGGCGGAG CTGGCTCCAC CAGGTGGTCC TGCACAACGG CAGATGGTTC
ACCTCCAGCT CGGCGGGGCT TGAGGCGGAC ACCGCGGACG GGCAGACCAA GCTGGTCATG
CCGCGGCCCC CGGCCGGCGC CCTGCGCTGG TTCCCCGCCG GGAACCAGAT CTACGCGGTC
GGCGCCGACC AGGTGAGCCC CGCCCGGGGC TGGTCGGTCA GGATCTTCGA CCAGCGGTCC
CACACGCTGG AGTTCCTGAT GGGCAAGCAG TCGGCGACCC TGGCCGGCCA TCTCACCTCC
CGCCACCGCT GGGAGCGCCC GAGACTGGTC GTCGACGGCG ACTCGATGTG GATGACCATG
CAGGACGCGG GGCGCAGCAG GCTCCTGCAC GTCACCCCGG GAGGGGCGCG GGAGGTGCAC
CGCACGCCGG GGATGTTCGA GCCGGTCGCC CGGGTCCCCA CGGGGCTGCT CTGCCTGCAT
CGTCCCGCGG ACGCGGCCGG GACCACCCGC GACCGGCCCG CGACCCTGGT GCACCTGCCG
CTCTGA
|
|---|
| Protein sequence | MAQWCLGVDL GTSFSAGVIA AEGRFDILEV EGERRIPSAV MLDEHGTLVA GRIAQRGIAI
SPERVERNPK RYVGRGRMLL GGVPVDVTDA MAALLELFVT EGRRRFDGAA PECVALTHPV
AWGADRKAVL LAAARKVVRG VRIVLIDEPV ASARYFASAG RAAGGSHLAV YDLGGGTFDA
AVLSVDGGDF SVLGEPGGSD EIGGEGFDEQ VFAFLGAQIE RLDPEWWQQV TTSPERRYVS
YAADLLKMAR EAKESLSKFD TSSHYVVGIN EDVHISRTDL EDLIGGEIVR TVDILDETIR
GSGIREEELG AVFMTGGASR MPLVQKVVRE RLGDRVRTYD DPKIVVAYGA AQLAWKLKVE
HRDPARSTGP ATGAAAGTAQ AVTGPHAGPR TGPTGGHRVP AGTAGGHQVF TGPAAGAGSP
TGPANAGGPA GAPTGGHAVV PAGTGAPTDG PTVKGIEKVL DGVLEARAEA GRVFVHQAFD
SGHLLRRLDG IEGRHDRELG FGRLVEWAAS REGVVAVEQV GPAQVLVRTL SSDLAIRATH
PLQMWGDPTV IAHGRTAWVF FQPRQTVAVD TTVGLPWGET GHLAMIELDL GGGFFFQAPP
TRDLGPYARW FVNEDNRLRR LLDQEGPSGT EPSPSVGAPG CTVVLGQFSS NKPIFQNRHQ
DFRPWQVLCL VDPGGAVRPT VREPGRSWLH QVVLHNGRWF TSSSAGLEAD TADGQTKLVM
PRPPAGALRW FPAGNQIYAV GADQVSPARG WSVRIFDQRS HTLEFLMGKQ SATLAGHLTS
RHRWERPRLV VDGDSMWMTM QDAGRSRLLH VTPGGAREVH RTPGMFEPVA RVPTGLLCLH
RPADAAGTTR DRPATLVHLP L
|
|---|
| |