Gene Sros_5964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5964 
Symbol 
ID8669258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6537065 
End bp6538990 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341442 
Protein GI271967246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0285067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.193033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC CCGACCCGAA CGGCCCTGTG ACCCGGCTGC TCCGCTACGC CAACGAGGTT 
CACTCGCTGG CCGGCCGGTG CGGCAGGGAG GACCTGGCGA AGGTGCTCGC CGCGTGCGCG
GGCCGCTGGA AGGACGAGTG CACCGACATC GTGGTCGCCG GGGCACAGAA GCGCGGCAAG
AGCCGCCTGC TGAACACGCT GGTGGGCCAC CCCGACCTGC TCCCGGTCGA CGCCGACGTC
GCCACCAACT GCTTCCTGTC CCTGCGTCGC GGCCCCGCCC TGACCGCCGT CGTGCACCGC
AGCACCGACG GCGGGCCGGT CCAGACCCCG ATCACCGTCG AGTCGATCCC CGACTACGCC
TCGATGCGCG GCGACGCCGG CAAGCGCCGT GACGTCGTCA GCGTGGACAT CACCCTCGAC
GCTCCCCTGC TCGACGGCCT GCGGCTGCTC GACACTCCCG GGGTGGACAG CCTGACCGTG
GGGCACCGGC AGGTCACCGT CGCCATGCTC CAGCGGGCCG ACGCGCTGCT CTTCACGCTC
AGCGCGCAGG ACCAGCCGGT GCTCCGGCAC GAGCTGGAGT TCCTCGCCGA GGCCGCCGAG
CGGGTCCAGG CGATCGCGTT CGTGCTGACC AAGGTGGAGG ACTCGGCCAA CTGGCAGAGC
CTGCAGGAGG AGAACAAGGC CCGGCTGAGG ACCTTCGTGA CCCAGGCCGT CGCGGAGAAC
CCGGCCAGGG CGGCGACGCT GGGCCCGCTG CTGGAGGCGC CCTGGATCCC GGTGAGCTCC
AAGCTCGCCG AGGCCGCCGA GGCCAAACGG CGGGAGGGCC GCCGGGAGCG CGCGGACACG
CTGCGCGCGC GTAGCGGCAT GGACGTGCTG GAACGGCACC TGCGGGGCTT CGCCGAGGGC
AGGGAGTCGG CCCGGGGCGC CACCGTGGTC GCCGCCGCGC TGTCGGTGCT GGGCGCGCTG
ACGGCCGGGG CCGAGGACGA CGTCGCCGCG GGCTCGGACG ACGAGGGCGA CGTCACCGCC
CGGCTCGCCG AGGTGGAGGC CGAGCTGACG GGGCTCGCCG AGCTGGCCGG CCGCCGCAGG
GCGGGCGCGG TGGCCAACAC CTTCCTCGGG CGCGAGGTGG CGGGGATCGT GGCGGCGCGG
GTGGCCGAGA TCCGCCAGCC GTACGAGAAC GCGATCGCCA CGCTGAAGAC GCAGGCCCAG
CTCGAGAAGT ACATGGCGGA GCTGCCGGAG AGCGTCCAGC GCTCGCTGGA GGCCATCTGG
TCGCAGATCG TCTACGACGT GGAGAACCTG GCGAAGGGCA CCCTGAACGC CTTCGCCCGC
GATCTCGGCC TCGATCCGGT GGAGCTCGCC GCCGACGGCC GGGCCATGCC CAGCCTGACG
CAGGTCCAGG TCAAGGGGGA TCTGGCGGCC GACGACCCGG GCCAGGTGGA CCTGGTCCGG
GACGTGCTGC CCGCCTCGTC GATGGGGTTG TCGTTCGGCG GCCTCGCCGC AGCCCTGCTC
GGCCCGGTGG GCTTCCTCCT GGTCGCCCCG GCCATCGGGG CGGCCATCTT CATGGGACGG
CGCTCCCTGG AGAAGGTCCA GCGCAGCCAG GCGGCGATCA GGGGGGCGCT CCGCGACCAG
TTCGCGGTGG TCGCCCGGGA GATGACGCTC GACCTGGAGC GGATGGTGGC CACCTGGCGG
GTCGGGGTCG AGCAGACGGC GGACGAGAGC CTCGTGCGGC GGCGCAAGGA GCTGGAGGGC
AGGCGCGCCG AGCTGAAGAC CTCCTCCACC CGGTCGGCGG CCGACCGGCG CAAGGCGCGG
CAGTCCGGTG AGGACCGGAT CGCCGCCATC GCCTCCCTCA CCACGCGCGG ACACGAGCTG
CGCAAGGAGC TCGCGGCCGC GGTGGCCGCC CTCGGCGCCG CCCCGGCCGG GACACCCGGA
AGCTGA
 
Protein sequence
MTTPDPNGPV TRLLRYANEV HSLAGRCGRE DLAKVLAACA GRWKDECTDI VVAGAQKRGK 
SRLLNTLVGH PDLLPVDADV ATNCFLSLRR GPALTAVVHR STDGGPVQTP ITVESIPDYA
SMRGDAGKRR DVVSVDITLD APLLDGLRLL DTPGVDSLTV GHRQVTVAML QRADALLFTL
SAQDQPVLRH ELEFLAEAAE RVQAIAFVLT KVEDSANWQS LQEENKARLR TFVTQAVAEN
PARAATLGPL LEAPWIPVSS KLAEAAEAKR REGRRERADT LRARSGMDVL ERHLRGFAEG
RESARGATVV AAALSVLGAL TAGAEDDVAA GSDDEGDVTA RLAEVEAELT GLAELAGRRR
AGAVANTFLG REVAGIVAAR VAEIRQPYEN AIATLKTQAQ LEKYMAELPE SVQRSLEAIW
SQIVYDVENL AKGTLNAFAR DLGLDPVELA ADGRAMPSLT QVQVKGDLAA DDPGQVDLVR
DVLPASSMGL SFGGLAAALL GPVGFLLVAP AIGAAIFMGR RSLEKVQRSQ AAIRGALRDQ
FAVVAREMTL DLERMVATWR VGVEQTADES LVRRRKELEG RRAELKTSST RSAADRRKAR
QSGEDRIAAI ASLTTRGHEL RKELAAAVAA LGAAPAGTPG S