| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5961 |
|---|
| Symbol | |
|---|
| ID | 8669255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6534287 |
|---|
| End bp | 6534835 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003341439 |
|---|
| Protein GI | 271967243 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00194759 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0574334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCG GGTCGCTGAG CAGTACCGTC GAGGACGAGA GTCGTCTCGT CGCGGCAGCG
CGGGCGGGTG ATGAGCAGGC CTTCGCCGAG CTGTGGTCGA CCGCGCAGCG CCAGGCCTTC
GGCGTCTGCT ACCACCTGAC CGGAAACCGC GCCGACGCGC TCGACGCGCT GCAGGAGACG
CAGCTCGCCG CGTGGAAGGG GCTGACCGCC TTCGAGGGCA GGGCGTCCTT CCGGTCCTGG
GTCCTCGTCA TCGCGCGCAA CGCCGCCCAC GCGGTGGTCC GGCGCCGCTC TCCCGGCGGG
GTGCTCTTCG CCGAAGTGGC CGAGGAGTCG GTGCTCACGG CCCCCTTCGA GGACTCCGTC
GCCCAGCTCG CCGACCTGCG CCGGGCGCTG GCCACGCTGC CGGCCTCCCA CCGGGAGGCG
CTGCTGCTGT GGGCGGGCGG CCTCACCTAC GAGCAGGTGG CGGCCTCGCT GGAGGTGCCG
CTCAACACGG TGAGGGCCTG GATCCACCGG GCCAGGCGGC GGCTTCAGGC CGGGCTCGCC
GGTGGCTGA
|
|---|
| Protein sequence | MTSGSLSSTV EDESRLVAAA RAGDEQAFAE LWSTAQRQAF GVCYHLTGNR ADALDALQET
QLAAWKGLTA FEGRASFRSW VLVIARNAAH AVVRRRSPGG VLFAEVAEES VLTAPFEDSV
AQLADLRRAL ATLPASHREA LLLWAGGLTY EQVAASLEVP LNTVRAWIHR ARRRLQAGLA
GG
|
|---|
| |