Gene Sros_5947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5947 
Symbol 
ID8669241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6518284 
End bp6519471 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341425 
Protein GI271967229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.9215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0109632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACA ACGAGGTGAT GGGTGGCCGC GCGCCGATCC GCATGTGGGC CGACCCGGCC 
GAGGTCGAGC CCGAGGTGAT GCAGCAGCTG CGCAACGTCG CGAACCTGCC GTGGGTGCAG
GGCGTCGCCG TGATGCCGGA CGTGCACCAC GGGATGGGCG CGACGGTGGG GTCGGTCATC
GCGATGCGGG ACGCGGTCTC GCCGGCGGCG GTGGGTGTGG ACATCGGGTG CGGGATGACC
GCGGTGAAGA CCTCGTTCAG GGCCGCCAAC CTGCCCGACA ACCTCGCCTA CCTGCGCTCG
AAGCTGGAGC AGGCGGTCCC CGTCGGGTTC GGTCACCACA AGAGGCCGGT CGACCCGACC
AGGCTGCACG GGATGAAGAC CGCCGACTGG GCGGGCTTCT GGAAGGACTT CGACACCCTG
GCCCCGGCCG TGCGCCCGAA GCGGGAGCGC GCCGAGGTGC AGATGGGCAC CCTGGGCGGA
GGCAACCACT TCCTGGAGGT CTGCGCCGAC GACGAGGGCG TGGTCTGGGT CGTGCTGCAC
TCCGGATCGC GCAACATCGG CAAGGAGCTG GCCGAGTTCC ACATCGGGCA GGCCCAGAAG
CTGCCGCACA ACCAGGACCT GCCCGACCGG AACCTCGCGG TGTTCGTCGG GGGCACGCCG
CAGATGGACG CCTACCGGCG GGACCTGTTC TGGGCGCAGG ACTACGCGCG GCGCAACCGG
GCGGTCATGA TGGCCCTGGT CTGCGACGTG CTCAGGCGTC ACCTGTCGGG CATCACCTTC
GAACAGCCGA TCTCCTGCCA CCACAACTAC GTGGCCGAGG AGCGGTACGA CGACGTGGAT
GTGCTCGTCA CCCGCAAGGG CGCGATCCGC GCGGGATCCG GCGAGTTCGG CATCATCCCC
GGCTCGATGG CGACCGGCAC CTACATCGTG AAGGGCCGGG GGAACGCCGG TGCGTTCAAC
TCGGCCTCAC ACGGTGCCGG TCGCCGGATG AGCCGGAGCA AGGCCAAGAA GACCTTCACG
CTGGCGGACT TCAAGGCGCA GACCGACGGC GTCGAGTGCC GCAAGGACAC CGGGGTGATC
GACGAGATCC CCGGCGCCTA CAAGGACATC CGGTCGGTCA TGGCGGCCCA GGCCGACCTG
GTCGAGGTGG TCGCCCGCCT CCGGCAGCTC ATCTGCATCA AGGGCTGA
 
Protein sequence
MTYNEVMGGR APIRMWADPA EVEPEVMQQL RNVANLPWVQ GVAVMPDVHH GMGATVGSVI 
AMRDAVSPAA VGVDIGCGMT AVKTSFRAAN LPDNLAYLRS KLEQAVPVGF GHHKRPVDPT
RLHGMKTADW AGFWKDFDTL APAVRPKRER AEVQMGTLGG GNHFLEVCAD DEGVVWVVLH
SGSRNIGKEL AEFHIGQAQK LPHNQDLPDR NLAVFVGGTP QMDAYRRDLF WAQDYARRNR
AVMMALVCDV LRRHLSGITF EQPISCHHNY VAEERYDDVD VLVTRKGAIR AGSGEFGIIP
GSMATGTYIV KGRGNAGAFN SASHGAGRRM SRSKAKKTFT LADFKAQTDG VECRKDTGVI
DEIPGAYKDI RSVMAAQADL VEVVARLRQL ICIKG