Gene Sros_5938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5938 
Symbol 
ID8669232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6510633 
End bp6511337 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003341416 
Protein GI271967220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.355908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00196456 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTCGAT CTGTTCTCGT AACCGGCGGC AACCGCGGCA TCGGCCTCGC GATCGCCCGC 
CAGCTCGCCC AGGCCGGTGA CGCCGTCGCC GTGACCTACC GCTCCGGAGA GCCCCCAGAG
GGCCTCTTCG GCGTGCGGTG CGATGTGACC AGCACGGCCG ATGTCGATGC GGCGTTCGGG
AAGATCGAGG CCGAGCACGG CCCGGTCGAG GTGCTCGTCG CCAACGCGGG CATCACCAGG
GACACGCTGC TGCCGATGAT GAAGGAGGAG ACCTTCGCCG ACGTCATCGA CGCCAACCTG
ACCGGCGCCT ACCGGGTGGC CAAGCGCGCC ACGCGCGGCA TGCTGCGGCT CAAGCGCGGC
CGGATCGTGC TGGTCTCCTC GGTGGTGGCC ATGCTCGGCT CGGCGGGGCA GAGCAACTAC
GCCGCCTCCA AGGCCGGGCT GATCGGCTTC GCCCGGTCCG TGGCCCGCGA GCTCGGTTCG
CGCGGCATCA CGGTCAACGT GGTCTCCCCG GGCTTCGTGG AGACCGACAT GACCGCCGCG
CTGGACGAGG CCCACCAGGA GCAGATCCGC AAGAACATCC CGCTGGGCCG CTACGCGAGC
GCCGACGAGG TCGCGCGCGT GGTCAAGTTC CTGGCGAGCG AGGACGCCGC CTACATCACC
GGGGCCGTCA TCCCCGTGGA CGGCGGGCTG GGAATGGGGC ACTGA
 
Protein sequence
MARSVLVTGG NRGIGLAIAR QLAQAGDAVA VTYRSGEPPE GLFGVRCDVT STADVDAAFG 
KIEAEHGPVE VLVANAGITR DTLLPMMKEE TFADVIDANL TGAYRVAKRA TRGMLRLKRG
RIVLVSSVVA MLGSAGQSNY AASKAGLIGF ARSVARELGS RGITVNVVSP GFVETDMTAA
LDEAHQEQIR KNIPLGRYAS ADEVARVVKF LASEDAAYIT GAVIPVDGGL GMGH