Gene Sros_5922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5922 
Symbol 
ID8669216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6492687 
End bp6493856 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content77% 
IMG OID 
ProductUroporphyrinogen-III synthase-like protein 
Protein accessionYP_003341400 
Protein GI271967204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0915623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0919141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CCCTTCTGGA CGACCCCGGC GGGTCTCCCG AGACGGCGCC CGACGCGCTG 
GCCGGGTTCA CGATCGGGGT GACCGCGACC AGGCGGCGTG AGGAGTTCTG CGCGCTGCTG
GAGCGGCGGG GCGCGAGAGT GGTGCGCGCC CCGGCGATCA GGCTGGTGCC GCTGGCCGAG
GACGCCGACC TGCTGGCCGC GACCCGGGCC GCTCTGACGG GCCCGCTCGA CGACGTGGTG
GTCACCACCG GGGTCGGGTT CCGGGGCTGG ATGGCCGCGG CCGAGGGCTG GGGGCTGTCG
GGCGACCTGT CGGCGCACCT GACCGCCGCC CGGCTGCTGA CCCGCGGGCC CAAGGCCCGC
GGCGCGGTCC GGGCCGCCGG GCTGAACGAC CACTGGACGC CGGCCACCGA GTCGTGCGAG
GAGGTCAAGC AGTACCTCCT TGCCCAGGAC CTGCGCGGTC GCCGCATCGC CGTGCAGTTG
CACGGGGAGC CGCTGACCGG CTTCGTGGCC GCGCTGCGCG AGGCGGGGGC CGAGGTCATC
GAGGTGCCGG TCTACCGGTG GCTGCCCTAC CGCGACACCT CGCCGCTGCG CCGCCTGATC
AGTCAGTCGA TCTCCGGCGG GGTGGACGCG GTGGCCTTCA CCAGCGCCCC CGCCGTGCTG
GCCATGCTCG CCGCGGCCCG CGCCGACGGC CTGGAGGACG CCCTGGTGGC GGCCTTCGCC
GGGCCGGTCG TCGCCGCCTG CGTGGGCCCG GTCACGGCGG CGCCGCTGCA GGCGCGCGGG
GTGCCCGCCG TACAGCCCGA GCGTGCCCGC CTCGGCGCGC TGGCCCGGAC GCTCGCCCGG
CACCTGCCCG AGCACAGCGT CACCCGCCTG CTCGCCGGCG GCCACGGGCT GGAGATCCGC
GGCCACGCCG TCGCCGTGGA CGGTGAGCTC AAGCCGCTGC CGCCGGCCCC GATGGCGGTG
CTCAAGCGCC TGGCCGACAA GCCGGGGCAC GTGGTGGCCC GCTCCGAGCT GCGCACCGTG
CTGCCCGGCG GCCCCTCCCG GGACTCGGCC GAACACGCCG TCGAGATGGC CATCACCCGC
CTGCGCCGCG CCCTGGGCCC CTCCGGCATC GTCGAGACGG TCGTCAAGCG CGGCTACCGC
CTGGCCTGCG ACCGCGGCGA GGCCATGTGA
 
Protein sequence
MSIALLDDPG GSPETAPDAL AGFTIGVTAT RRREEFCALL ERRGARVVRA PAIRLVPLAE 
DADLLAATRA ALTGPLDDVV VTTGVGFRGW MAAAEGWGLS GDLSAHLTAA RLLTRGPKAR
GAVRAAGLND HWTPATESCE EVKQYLLAQD LRGRRIAVQL HGEPLTGFVA ALREAGAEVI
EVPVYRWLPY RDTSPLRRLI SQSISGGVDA VAFTSAPAVL AMLAAARADG LEDALVAAFA
GPVVAACVGP VTAAPLQARG VPAVQPERAR LGALARTLAR HLPEHSVTRL LAGGHGLEIR
GHAVAVDGEL KPLPPAPMAV LKRLADKPGH VVARSELRTV LPGGPSRDSA EHAVEMAITR
LRRALGPSGI VETVVKRGYR LACDRGEAM