Gene Sros_5914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5914 
Symbol 
ID8669208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6483561 
End bp6484556 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter, permease protein 
Protein accessionYP_003341392 
Protein GI271967196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0959358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0354831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC CGCTCGATGT TCCTGGCTCG GCTACGGAGG CGGACCCCGA AGCCGTGCTC 
GCGGGCGCGG ATCGGAAGGC CATCCAAGGC CGCTCTCTCG GTCAGATCGC CTGGATGAGG
CTGAAGCGTG ACAAGATCGC TCTCGCGGGA GCGGGAGTCA TCATCTTCCT CATCCTGGTG
GCGCTCCTCG CGCCGCTCAT CGTGAAGTTC CTCGGCCATC CGCCGCTGGA GTTCCACCGT
GAGAAGATCG ACCAGTCCAC GCTGACGCCC AAAGATGCGT TCGGCGGTAT GAGCTGGGAC
TACCTGTTCG GCGTCGAGCC CCTCTGGGGG CGCGACATCT TCAGCCGGAT CGTCTACGGC
GCCCGGATCT CCCTGCTCAT CGCCTTCCTG GCCACCCTGC TCTCGGTGGT CATCGGCACC
GTCCTCGGTG TCGTCGCCGG CTACTTCGGC GGCTGGGTCG ACGCCGTGAT CAGCCGGGCG
ATGGACGTCT TCCTGGCCTT CCCGCTGCTG GTGTTCGCCA TCGCCCTCGC CGGCGTCGTG
CCCGACCAGG CGTTCGGCAT GTCCGGCGAC ACCCTGCGCG TATCGTTGCT GGTGTTCATC
ATCGGATTCT TCAGCTGGCC GTACATCGGC CGGATCGTCC GAGGTCAGAC CCTCTCCCTG
CGTGAACGGG AGTTCGTCGA CGCGGCCAGG AGCCTCGGCG CCCGTGGGCC GTACATCATC
TTCCGTGAGC TGCTGCCCAA CCTGATCGCG CCGATCCTGA TCTACGCGAC GCTGGTCATC
CCGACCAACA TCCTGTTCGA GGCGGCGCTG TCCTTCCTCG GTGTGGGCGT CCGCCCGCCG
ACACCGACCT GGGGCGGCAT GCTCGCCGAG GCGGCGCGCT TCTACACGGT GCCGCACTTC
GCGATCTTCC CTGGTTTGGC GATCTTCGTG ACCGTGCTGG CCTTCAACCT CTTCGGAGAC
GGCCTGCGTG ACGCGCTGGA CCCGCGCGGC CGTTGA
 
Protein sequence
MTAPLDVPGS ATEADPEAVL AGADRKAIQG RSLGQIAWMR LKRDKIALAG AGVIIFLILV 
ALLAPLIVKF LGHPPLEFHR EKIDQSTLTP KDAFGGMSWD YLFGVEPLWG RDIFSRIVYG
ARISLLIAFL ATLLSVVIGT VLGVVAGYFG GWVDAVISRA MDVFLAFPLL VFAIALAGVV
PDQAFGMSGD TLRVSLLVFI IGFFSWPYIG RIVRGQTLSL REREFVDAAR SLGARGPYII
FRELLPNLIA PILIYATLVI PTNILFEAAL SFLGVGVRPP TPTWGGMLAE AARFYTVPHF
AIFPGLAIFV TVLAFNLFGD GLRDALDPRG R