Gene Sros_5911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5911 
Symbol 
ID8669205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6479590 
End bp6480615 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID 
Productoligopeptide ABC transporter ATP-binding protein 
Protein accessionYP_003341389 
Protein GI271967193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.19666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.020485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTCC TTGAACTGAA GGACCTGAAG ATCCACTTCC CGACCGACGA CGGGCTGGTC 
AAGTCCGTCG ACGGGCTGAC CTTCTCGCTG GAGCGGGGCA GCACGCTCGG GATCGTGGGA
GAGTCCGGAT CCGGAAAGAG CGTCACCAGC CTGGGCATCC TGGGGCTGCA CAAGGGCGGC
CACGCCAGGA TCTCCGGTGA GATCTGGCTG GACGGGGAGG AGCTGGTCAG CGCCTCCCAG
GAGCACGTGC GCGGGCTGCG CGGCAAGAAG ATGGCGATGA TCTTCCAGGA TCCGCTGTCG
GCGATGCACC CCTACTACAC GGTCGGCGAC CAGATCGTGG AGGCATACCG GATCCACCAC
AGCGTGAACA AGAAGGTCGC GCGCAAGCAC GCGATCGACA TGCTCGGCCG GGTGGGCATC
CCGGAGCCGG GCCGCCGGGT GGACGCGTAT CCGCACGAGT TCTCCGGCGG CATGCGGCAG
CGCGCGATGA TCGCGATGGC GCTGTCGTGC GACCCGGAGC TGCTGATCGC CGACGAGCCG
ACCACCGCGC TGGACGTGAC CGTACAGGCC CAGATCCTGG ACCTGATGCG GGATCTGCAG
CGGGAGTTCA ACTCCGCCCT CATCATCATC ACCCACGATC TGGGCGTCGT GGCCGAGCTG
TCGGACGACA TCCTGGTCAT GTACGGCGGC AAGTGCATCG AGTACGGCGC GGCGGAGGAC
ATCTTCTACC GTCCCGAGCA CCCCTACACA TGGGGTTTGC TGGGGTCGAT GCCCCGCCTG
GACCGGGAGC GCACCGAGCG GCTGATGCCG ATCAAGGGCT CCCCGCCCTC ACTGATCAAC
ATCCCGTCGG GCTGCGCCTT CCACCCCCGC TGCCCCTACT CCGACCGGAC GCACAGCAAG
GCCGACACCG AGGTGCCGGC TCTCCTGGAG ACCGAGGGCG GTCACCTGGT CCGCTGCCAC
CTGCCCCGTG AGGAGCGGCG GTCGCTCTGG GAGAACGAGA TCAAGCCGAT GCTGGAGACC
ACGTGA
 
Protein sequence
MSFLELKDLK IHFPTDDGLV KSVDGLTFSL ERGSTLGIVG ESGSGKSVTS LGILGLHKGG 
HARISGEIWL DGEELVSASQ EHVRGLRGKK MAMIFQDPLS AMHPYYTVGD QIVEAYRIHH
SVNKKVARKH AIDMLGRVGI PEPGRRVDAY PHEFSGGMRQ RAMIAMALSC DPELLIADEP
TTALDVTVQA QILDLMRDLQ REFNSALIII THDLGVVAEL SDDILVMYGG KCIEYGAAED
IFYRPEHPYT WGLLGSMPRL DRERTERLMP IKGSPPSLIN IPSGCAFHPR CPYSDRTHSK
ADTEVPALLE TEGGHLVRCH LPREERRSLW ENEIKPMLET T