Gene Sros_5899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5899 
Symbol 
ID8669193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6467263 
End bp6468678 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341377 
Protein GI271967181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.529842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0437244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AGGGCTTCGG GGTGGTGCGT CCGCTTCCGG GCAACGGGCT GGTCGCCCAC 
GTGGGTGGTC TGCTGCTGGT GTGTGACGCG GCCGAGGCCG TCGTGGAGGA CCTGCTGGGG
GCGTTGAGGG AGACCGCGGC CTCGGGCGGG GACGGCCGCG CGCTGGCCCG CCGGGTCGCC
CAGGTGCTGG CCGTCATGAT GGGCGAGCCC GTGGCGTGCG CCGTCGCCGG TCCCGTCACC
GGGGGAGTGG CCGTGCTGGT CAGCGGCCCG GCCTTCGCTT CGGTCACCGG CTCGGGCGGC
GAGGTCCAGC TGGCCGGGCG TGACGCGCTC ACCTGGTCCG ACCGGCTGGT GCCCGGCCCG
GTGACCCGGG TGGAGCTGCG CCTGCCCGAG GCCGGCGAGG CGCACCCGCT CGCCCGGCTG
GACGGCGGTG TCATCGTCGG CGGCGGCGTC TGGTGCGACC TGACCGAGGG CGGGGGGCCA
TCGGCCGTCC AGCGGCCCGC GCCCCGGGCG GAGACCGCTC CGCCGGCCGT CCGGCCGTCC
GCGCCGCAGG CGGAGGCCGT CTCCCCGGCG GAGCCGCCGG CTCCGGCGCG CCCCGAACGG
TCGGCACCCC CGGTGGACAG CGCACCGCCG GCGCCCTACC CGATGAGCTC TCCCGAGCAC
TACCCTCCGG TCCCCGTCCC GCTGCCCGCG CCGGAGCCCC ATCTCTCCGC GCCGCCGGCG
TGGCAGCCCG ACCCCATGCC GGTCCCACCG CAGGGGCCAC CCTCCGGGCC GGTTCCGGTC
GCGGTCCCGC AGGAAGAGGT GGAGACCGCC AGGGCGAGCG GGATCGGCGG CGACCCCGTC
GACGCCCGTG ACCAGCCGTT CGAGTACGAA CTGCTGACCC CGGACGGTCC GCAGGCCGCG
CCCGAGCCGC CTTCCGGGCC GGAGCCGCAG CCGGAGTCGC GACCGCTGGT CTACGGGGTG
GACTGCAAGA ACGACCACTT CAACGACCCG CGCGTGCCGT ACTGCGCGGT CTGCGGCATC
GCGCTGGTGC AGCGCACGCT CGTCCCCTAC AAGGGACCGC GCCCGCCGCT GGGCGTGCTG
CTCCTCGACG ACGGCATGAC GCTCCGCCTC GACACCGACT ACCTGGTCGG CCGCGACCCC
GAGCGGGCCC CCGAGGTCGC CGACGGCTCG GTGCGCCCGG CCAAGGTCAC CAGCCCCGAC
GGGTCGGTCT CCCGCCGTCA CCTGCGGGTG GCGCTGGACG GCTGGGACGT CAACCTGGTC
GACCTGGGAT CGGTCAACGG CACCCAGATC CAGCCGCCGG GCGACCCCAA CTTCTACGAC
ATCCCGCCGA ACGAGGCGGT CGCGATCCTG CCCGGCACGA CCGTGCGGAT CGGCGTCTCC
CGCACCATGC GCTACGAGTC GCACCGCAAC CGCTAG
 
Protein sequence
MTDEGFGVVR PLPGNGLVAH VGGLLLVCDA AEAVVEDLLG ALRETAASGG DGRALARRVA 
QVLAVMMGEP VACAVAGPVT GGVAVLVSGP AFASVTGSGG EVQLAGRDAL TWSDRLVPGP
VTRVELRLPE AGEAHPLARL DGGVIVGGGV WCDLTEGGGP SAVQRPAPRA ETAPPAVRPS
APQAEAVSPA EPPAPARPER SAPPVDSAPP APYPMSSPEH YPPVPVPLPA PEPHLSAPPA
WQPDPMPVPP QGPPSGPVPV AVPQEEVETA RASGIGGDPV DARDQPFEYE LLTPDGPQAA
PEPPSGPEPQ PESRPLVYGV DCKNDHFNDP RVPYCAVCGI ALVQRTLVPY KGPRPPLGVL
LLDDGMTLRL DTDYLVGRDP ERAPEVADGS VRPAKVTSPD GSVSRRHLRV ALDGWDVNLV
DLGSVNGTQI QPPGDPNFYD IPPNEAVAIL PGTTVRIGVS RTMRYESHRN R