Gene Sros_5891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5891 
Symbol 
ID8669185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6456991 
End bp6458754 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content65% 
IMG OID 
ProductATP-dependent 26S proteasome regulatory subunit- like protein 
Protein accessionYP_003341369 
Protein GI271967173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0900472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCTC GCGACGACGC TGAGGCTCGA GCCGCGCAGC GCGAACGGGA GGTCGCTGAC 
CTCACAACAC AGGTCTCCTT CCTGCAGGAG GAGCTCACCG CGCTACGTCG GAAGTTGACG
GAGTCTCCCC GGCAGGCCAG GGTCCTCGAA GAGCGTCTCC ATGAAGTGCA GGCGAATCTG
GCAGCCGTCA CAGGCCAGAA CGAGCGTCTG GTGGCCACCC TCAAGGAGGC CAGAGACCAG
ATCGTCGCGC TGAAGGAGGA AGTCGACCGG TTGGCGCAGC CGCCATCCGG GTTCGGCGTG
TTCCTCGAAA GCAGGGAAGA CGGCACGGTG GAGGTCTTCA CCGGTGGCCG CAAACTTCGA
GTGAACGTCA GTCCAGCGGT GGAGGTCGAC TCGCTGAAGC GTGGCCAGGA GGTCATGCTC
AACGAGGCGC TCAACGTGGT GGAGGCCCTC GGGTTCGAGG AACTCGGCGA GATCGTGATG
CTCAAGGAGC TCCTTGAGGA CGGCCGGCGC GCGCTGGTGA TCTCGCACGC CGACGAGGAG
CGGGTGGTGA AGCTCGCCGA GTCGTTGGTC GGCCAGCCGA TCCGGGCGGG CGACTCCCTG
CTGCTGGAAC CGCGCTCGGG CTACGTCTAC GAGCGCATCC CCAAGTCCGA GGTCGAAGAG
CTCGTCCTGG AGGAGGTGCC CGACATCTCC TACGAGGAGA TCGGCGGGCT CATGCGGCAG
ATCGAGCAGA TCCGGGACGC GATCGAGCTT CCCTACCTGC ACGCCGACCT CTTCCGCGAG
CACAAGCTCC GTCCGCCGAA GGGCGTGCTG CTGTACGGTC CGCCCGGCTG CGGCAAGACG
CTCATCGCCA AGGCCGTCGC CAACTCCCTG GCCAAGCAGG TCGCGGAGAA GACCGGCCAG
TCCGGTAAGA GTTTCTTCCT CAACATCAAG GGTCCCGAGC TTCTCAACAA GTACGTCGGC
GAGACCGAGC GGCACATCCG CCTGGTCTTC CAGCGGGCCC GTGAGAAGGC CTCCGAGGGC
ACCCCGGTGA TCGTGTTCTT CGACGAGATG GACTCGATCT TCCGGACCCG AGGCTCGGGC
GTCTCCTCCG ACGTCGAGAA CACCATCGTT CCCCAGCTCC TGTCGGAGAT CGACGGCGTC
GAGGGCCTGG AGAACGTGAT CGTGATCGGC GCCTCCAACC GCGAGGACAT GATCGACCCG
GCGATCCTGC GGCCCGGCCG TCTGGACGTC AAGATCAAGA TCGAGCGGCC GGACGCCGAG
GCGGCCAAGG ACATCTTCTC GAAATACCTC ATCGAAGACC TCCCCCTCCA TCCCGAGGAC
CTCGCCGAGC ACGGCGGAAG CCGCGGGGGC ACCATCTCGG GCATGATCCA GCGGGTGGTC
GAGCGGATGT ACACCGAGAG CGAGGAGAAC CGCTTCCTCG AGGTGACCTA CGCCAACGGC
GACAAGGAGG TCCTGTACTT CAAGGACTTC AACTCCGGCG CCATGATCCA GAACATCGTC
GACCGCAGCA AGAAGATGGC GATCAAGCAG TTCCTCGAGT CCGGGCAGAA GGGCCTGCGG
ATCCAGCATC TGCTGGCGGC CTGCGTGGAC GAGTTCTCCG AGAACGAGGA CCTGCCCAAC
ACCACCAACC CCGACGACTG GGCCCGCATC TCCGGCAAGA AGGGCGAGCG GATCGTCTAC
ATCCGCACCC TCGTGACGGG CAAGCAGGGC ACCGAGGCCG GTCGATCCAT CGACACGGTG
GCCAACACCG GCCAGTACCT CTAG
 
Protein sequence
MAARDDAEAR AAQREREVAD LTTQVSFLQE ELTALRRKLT ESPRQARVLE ERLHEVQANL 
AAVTGQNERL VATLKEARDQ IVALKEEVDR LAQPPSGFGV FLESREDGTV EVFTGGRKLR
VNVSPAVEVD SLKRGQEVML NEALNVVEAL GFEELGEIVM LKELLEDGRR ALVISHADEE
RVVKLAESLV GQPIRAGDSL LLEPRSGYVY ERIPKSEVEE LVLEEVPDIS YEEIGGLMRQ
IEQIRDAIEL PYLHADLFRE HKLRPPKGVL LYGPPGCGKT LIAKAVANSL AKQVAEKTGQ
SGKSFFLNIK GPELLNKYVG ETERHIRLVF QRAREKASEG TPVIVFFDEM DSIFRTRGSG
VSSDVENTIV PQLLSEIDGV EGLENVIVIG ASNREDMIDP AILRPGRLDV KIKIERPDAE
AAKDIFSKYL IEDLPLHPED LAEHGGSRGG TISGMIQRVV ERMYTESEEN RFLEVTYANG
DKEVLYFKDF NSGAMIQNIV DRSKKMAIKQ FLESGQKGLR IQHLLAACVD EFSENEDLPN
TTNPDDWARI SGKKGERIVY IRTLVTGKQG TEAGRSIDTV ANTGQYL