Gene Sros_5887 details

Gene Information

• Locus tag: Sros_5887
• ID: 8669181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptosporangium roseum DSM 43021
• Kingdom: Bacteria
• Replicon accession: NC_013595
• Strand: -
• Start bp: 6452736
• End bp: 6453485
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 74%
• Product: hypothetical protein
• Protein accession: YP_003341365
• Protein GI: 271967169

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0269514
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.859333
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCACCA AACTCATCGT CCGGGGCATG CTCGCCGGAC TGCTCGCAGG GCTGTTCGCG 
GCCGTCTTCG CCTACACCGT GGGCGAGCCG CGCATCGACC GGGCCATCGC GCTGGAGGAG 
GCGGCCGCGG CCGCCGCCCC GGCCGCCGGA ACCCACTCCC ACGAGGAGGC CGAACCCGCG 
GGCCACTCCC ACGAGGAGGG GGAGGCGCTG GTCAGCAGGG ACGGCCAGCG CTTCGGGCTC 
TTCCTGGCCC TCGGCCTGTA CGGCGTGGCC GTCGGCGGCC TGTTCGCCCT CGCCTACGCC 
GCCGTGCGCG GCCGGGCCGG ACCCCGCTCG GAACCGGTGC TCGCGATCAC TCTCGCGGCC 
GCCGCGTTCA CCGCGATCGT CCTCGTCCCC TTCCTGAAAT ATCCCGCCAA CCCGCCCGCC 
GTCGGCGACC CCGAGACGAT CAACCAGCGC ACCGTGCTCT ACCTGGTCGC GGTGGTCATC 
GGGATCCTGG CCGTCGCCGC GGGCGCCGCC ACCCACCGCT ATGCCACCCG GAGCGAGCCC 
TGGCTGCGCT GGTCGGCCAC GGGCGCCACG GTGCTCGTCC CGGTGGCGGC GGCCTGGATC 
CTGCTGCCGG AGATCGACGA GGTGCCCCAG GGGTTCCCCG CCGACCTGCT GTGGGACTTC 
CGGATCGCCT CCATCGGCAC CCAGGCGGTC TTCTGGCTCG GGGTCGGCGT CCTGTTCGCC 
TTCGCCGCGC GCAGGCGCAG CCCGGTGTGA 

 

Protein sequence

MITKLIVRGM LAGLLAGLFA AVFAYTVGEP RIDRAIALEE AAAAAAPAAG THSHEEAEPA 
GHSHEEGEAL VSRDGQRFGL FLALGLYGVA VGGLFALAYA AVRGRAGPRS EPVLAITLAA 
AAFTAIVLVP FLKYPANPPA VGDPETINQR TVLYLVAVVI GILAVAAGAA THRYATRSEP 
WLRWSATGAT VLVPVAAAWI LLPEIDEVPQ GFPADLLWDF RIASIGTQAV FWLGVGVLFA 
FAARRRSPV