Gene Sros_5876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5876 
Symbol 
ID8669170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6439650 
End bp6440855 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341354 
Protein GI271967158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00230723 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.686099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGC TGCGCGTCAC CGGCCGCTGG ACCCCGGAGG ACCGCCTGGC CTCCCCCGTC 
CACGACGTCC CGTTCGAGCT GCCCGCCGAC GCCCGCGGTT TCACCGTCCG GCTCTCCTAC
GACCGCTCCG CGGGCGTGCT GGACCTCGGC TGCCACGGGC CGCTGGGCTT CCGCGGCTGG
TCCGGCGGCG CCCGCTCCGA ATACACGATC ACCCCCGCCT GGGCCACCCC CGGCTACCTG
TCCGGCGAGC CCGAACCCGG CCTCTGGCGG ATCCTGCTCG GCCTCCACCG CGTCCCGCCG
GGCGGCCTGC CGTACGAGCT GAGCGTCATC CCGCACCTGT CCCCGCCCGT CACGCCGCCC
GCCGGGCCCG GCCTGCGGCC CCCTCCCCCG CCCCGCGAGC CGGCCGCGAC CAGGCGCGGC
CTGCCCTCGC TCGGCGGGCT GCGCTGGCTC GCCGGGGACC TGCACACCCA CACCGTCCAC
TCCGACGGCT CGCTCAGCGT CTCCGAGCTC GCCTGCCTGG CCGCCGACCG GGGCCTGGAC
TTCCTCGCCG TCACCGACCA CAACACCGTC AGCCACCACA CGGAGCTGCC CGCCGCCGCC
ACCTACGCCG CCATCACCCT CATCCCCGGC CAGGAGGTCA CCACCGACCT CGGCCACGCC
AACGCCTTCG GCGACATCGG CTGGATCGAC TTCCGCGACA GCCCCGACCT GTGGGCGCGG
ACCGTGCGGG ACAGGGGCGG GGTGCTGTCG ATCAACCATC CCGTCGCCGG CGACTGCGCG
TGGCGCCACC CCATGACCGC GCGGCCGCCC GCCGTCGAGG TGTGGCACTG GAGCTGGTGG
GACCGGACCT GGGGCGCGCC GCTGGCCTGG ACGCAGCTCT GGTCGGCCGG GGCGACGATG
ATCGGCGGCA GCGACTACCA CCGGCCCGAG GAGGGCCACC CGCCCGGCGA CCCCACCACC
TGGGTGCTCG CCGGCGACCC CCTCGAAGGG CTGCGCGCCG GCGGCACCGC CGTGTCCGCC
ACCCCCGACG GGCCGCTGCT GCTCCGCCAC GGCGACGACT TCCTCATCGT CGGCGGCGAC
GGGCTGGTGC TGTGGGGGCC GGACACCCGC CGGGCCGTCA TCGGCGACAG GGTCACCGTC
CCGGCCCGGC CCGGACCCCA CCGGCTGGAG ACCTACCGCA ACGAGGTGAT GGCACTGTGC
ACGTGA
 
Protein sequence
MRALRVTGRW TPEDRLASPV HDVPFELPAD ARGFTVRLSY DRSAGVLDLG CHGPLGFRGW 
SGGARSEYTI TPAWATPGYL SGEPEPGLWR ILLGLHRVPP GGLPYELSVI PHLSPPVTPP
AGPGLRPPPP PREPAATRRG LPSLGGLRWL AGDLHTHTVH SDGSLSVSEL ACLAADRGLD
FLAVTDHNTV SHHTELPAAA TYAAITLIPG QEVTTDLGHA NAFGDIGWID FRDSPDLWAR
TVRDRGGVLS INHPVAGDCA WRHPMTARPP AVEVWHWSWW DRTWGAPLAW TQLWSAGATM
IGGSDYHRPE EGHPPGDPTT WVLAGDPLEG LRAGGTAVSA TPDGPLLLRH GDDFLIVGGD
GLVLWGPDTR RAVIGDRVTV PARPGPHRLE TYRNEVMALC T