Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5871 |
Symbol | |
ID | 8669165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6434100 |
End bp | 6434948 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | 20S proteasome alpha and beta subunits-like protein |
Protein accession | YP_003341349 |
Protein GI | 271967153 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.609648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGATCGC ACAGGGACCT GCCCGCCGGC ATGGTGAATC ACATCTTCAC GAACAGCGGC ATTTCCTCGT TCACCGAGTT CGTCGGCTCC TACGCGCCGG ACTTGTTGCC CGGCCGAAAC GAGACCCTGG CAGCCCCGGT CGGCGACCGG ATTCCACACG CCACCACGAT CGTCGCGGCG ACCTGCGCGG GTGGCGTGGT GATGGCCGGT GACCGCCGGG CGACCTCGGG AAACATCATC TCCCAGCGAG ACATGGAGAA GGTGTTCCGC ACCGACGACT ACTCGTGCAT GGGCATCGCC GGGACGGCGA GCACGGGCAT CGAGATGGCC CGGCTCTACC GGGTCGAGCT TGAGCACTAC GAGAAGATGG AGGGCCGCAC GCTCTCCGTG GCGGGCAAGG CCAACCGGCT CGCCACCATG ATCCGCGGCA ATCTCGGCAT GGCGATGCAG GGCCTGGTCG TGGTGCCGCT GTTCGCCGCC TACGACCCCG AGATCGACGG CGGCCGGATC TTCGGCTACG ACGTGGGAGG CGGCCCCTAC GAGCAGCAGC AGTACCACTC GATCGGCTCC GGCTCGATCT TCGCGCGGGG CTCGCTGAAG AAGCTCTACC GGGAGAACGC CTCGCCCGAG GAGGTCGTGC TGACGCTCAT CCACGCCCTG TACGACGCCG CCGACGACGA CTCGGCGACC GGCGGCCCCG ACGTCACCCG TAAGATCTGG CCCGTCGTAG CGCAGATCAC CGCCGACGGC TTCCACCGTC TGTCCGACGA GGAGGTGGGC GGGCACGTCC AGACCGTCCT CCAAGAGCGG ATGAGCTCCC CCGACGGCCC CGTCGCCCCG CTGCGCTAA
|
Protein sequence | MGSHRDLPAG MVNHIFTNSG ISSFTEFVGS YAPDLLPGRN ETLAAPVGDR IPHATTIVAA TCAGGVVMAG DRRATSGNII SQRDMEKVFR TDDYSCMGIA GTASTGIEMA RLYRVELEHY EKMEGRTLSV AGKANRLATM IRGNLGMAMQ GLVVVPLFAA YDPEIDGGRI FGYDVGGGPY EQQQYHSIGS GSIFARGSLK KLYRENASPE EVVLTLIHAL YDAADDDSAT GGPDVTRKIW PVVAQITADG FHRLSDEEVG GHVQTVLQER MSSPDGPVAP LR
|
| |