Gene Sros_5871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5871 
Symbol 
ID8669165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6434100 
End bp6434948 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID 
Product20S proteasome alpha and beta subunits-like protein 
Protein accessionYP_003341349 
Protein GI271967153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.609648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATCGC ACAGGGACCT GCCCGCCGGC ATGGTGAATC ACATCTTCAC GAACAGCGGC 
ATTTCCTCGT TCACCGAGTT CGTCGGCTCC TACGCGCCGG ACTTGTTGCC CGGCCGAAAC
GAGACCCTGG CAGCCCCGGT CGGCGACCGG ATTCCACACG CCACCACGAT CGTCGCGGCG
ACCTGCGCGG GTGGCGTGGT GATGGCCGGT GACCGCCGGG CGACCTCGGG AAACATCATC
TCCCAGCGAG ACATGGAGAA GGTGTTCCGC ACCGACGACT ACTCGTGCAT GGGCATCGCC
GGGACGGCGA GCACGGGCAT CGAGATGGCC CGGCTCTACC GGGTCGAGCT TGAGCACTAC
GAGAAGATGG AGGGCCGCAC GCTCTCCGTG GCGGGCAAGG CCAACCGGCT CGCCACCATG
ATCCGCGGCA ATCTCGGCAT GGCGATGCAG GGCCTGGTCG TGGTGCCGCT GTTCGCCGCC
TACGACCCCG AGATCGACGG CGGCCGGATC TTCGGCTACG ACGTGGGAGG CGGCCCCTAC
GAGCAGCAGC AGTACCACTC GATCGGCTCC GGCTCGATCT TCGCGCGGGG CTCGCTGAAG
AAGCTCTACC GGGAGAACGC CTCGCCCGAG GAGGTCGTGC TGACGCTCAT CCACGCCCTG
TACGACGCCG CCGACGACGA CTCGGCGACC GGCGGCCCCG ACGTCACCCG TAAGATCTGG
CCCGTCGTAG CGCAGATCAC CGCCGACGGC TTCCACCGTC TGTCCGACGA GGAGGTGGGC
GGGCACGTCC AGACCGTCCT CCAAGAGCGG ATGAGCTCCC CCGACGGCCC CGTCGCCCCG
CTGCGCTAA
 
Protein sequence
MGSHRDLPAG MVNHIFTNSG ISSFTEFVGS YAPDLLPGRN ETLAAPVGDR IPHATTIVAA 
TCAGGVVMAG DRRATSGNII SQRDMEKVFR TDDYSCMGIA GTASTGIEMA RLYRVELEHY
EKMEGRTLSV AGKANRLATM IRGNLGMAMQ GLVVVPLFAA YDPEIDGGRI FGYDVGGGPY
EQQQYHSIGS GSIFARGSLK KLYRENASPE EVVLTLIHAL YDAADDDSAT GGPDVTRKIW
PVVAQITADG FHRLSDEEVG GHVQTVLQER MSSPDGPVAP LR