Gene Sros_5870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5870 
Symbol 
ID8669164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6433301 
End bp6434074 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID 
Product20S proteasome alpha and beta subunits-like protein 
Protein accessionYP_003341348 
Protein GI271967152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.42394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTG GATATGTCTC GCCCGAGCAG CAGATGCGGG ACAAGGCGGA CTACGCGCGA 
AAGGGGATCG CGCGGGGCCG TAGCGTCGTC GTGCTGCAGT ACGAGCACGG CATCCTGTTC
GTCGCCCCCA ACCCCTCCCG GGCCCTGCAC AAGATCAGCG AGATCTACGA CAGGATCGGG
TTCGCCGCGG TCGGCCGCTA CAACGAGTTC GAGGCGCTGC GTCTCGGCGG CATCCGCTAC
GCCGACATCA ACGGCTACAA CTACGCGCGC GACGACGTCA CCGCGCGCGG CCTGGCCAAC
CTCTACGCGC AGAACCTCGG CCAGATCTTC ACCGAGTCGA TGAAGCCGTT CGAGGTCGAG
ATCGTGGTGG CCGAGGTCGG CGACTCCTCC GACGAGGACC ACATCTACCG CCTCACCTTC
GACGGCTCGG TCTTCGACGA GACCGGTCTG GTGGCGATGG GCGGTCAGGC CGAGGCGGTG
GCGGGCCGGC TCAAGGAGCG TTACCGCGAC GGGCTGCCGC TGGCCGAGGC GCTGGAGGCG
GCGCTGTTCG CGCTGACCGA GCCGGGCGGT GAGCGCTCTC CGGCCAGCCA GCTGGAGGTC
GCGGTGCTCG ACCGCAACCG TCCGCACCGC AAGTTCCTGC GGCTCGCCGG CCCGCGGCTG
GAGCGCCTGC TGGCCGAGGG GTCCGCCACG TCCGCCACGT CCGCGACGCC CGGGGAGGCC
GAGGCTCCGG CCACCGCCCC CGAGGGAGAC GTCGACACCG GTTCGAACGG CTGA
 
Protein sequence
MPFGYVSPEQ QMRDKADYAR KGIARGRSVV VLQYEHGILF VAPNPSRALH KISEIYDRIG 
FAAVGRYNEF EALRLGGIRY ADINGYNYAR DDVTARGLAN LYAQNLGQIF TESMKPFEVE
IVVAEVGDSS DEDHIYRLTF DGSVFDETGL VAMGGQAEAV AGRLKERYRD GLPLAEALEA
ALFALTEPGG ERSPASQLEV AVLDRNRPHR KFLRLAGPRL ERLLAEGSAT SATSATPGEA
EAPATAPEGD VDTGSNG