| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5856 |
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| Symbol | |
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| ID | 8669150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 6419205 |
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| End bp | 6421934 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | putative nuclear exosomal RNA helicase MTR4 ; K01529 |
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| Protein accession | YP_003341334 |
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| Protein GI | 271967138 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.169326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.918517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC CAGCGGAACG TTACGCTGCT TTCCGTCAGA GCCAGGCTGA CAGCGGGCCG
GCGCTGACCT CGTTCCGCGG TCTTTACGAC TTCGACCTGG ATGACTTCCA GCTGGACGCC
TGCCGGGCGC TGGAGGCGGG CGACGGAGTC CTCGTAGCCG CCCCGACCGG ATCCGGCAAG
ACCGTCGTGG GTGAGTTCGC GGTCCACCTC GCGCTGGAGC AGGGCCGCAA GTGCTTCTAC
ACCACCCCGA TCAAGGCGCT GTCCAACCAG AAGTACAACG ACCTGGTCAG ACGGTACGGG
GCGGCCGGCG TCGGCCTGCT CACCGGCGAC AACAGCATCA ACGGCGACGC CCCGATCGTC
ATCATGACGA CCGAGGTCCT GCGCAACATG CTCTACGCCG GCTCCGGCAC CCTGGCGGGC
CTCGGCTTCG TCGTCATGGA CGAGGTGCAC TACCTGGCCG ACCGGTTCCG CGGCGCGGTC
TGGGAAGAAG TGATCATCCA CCTGCCCGAG TCGGTGCGGC TGGTCGCCCT CTCGGCCACG
GTCAGCAACG CCGAGGAGTT CGGCGAGTGG ATGGGCGAGG TCCGCGGCGA CACCAGCGTC
ATCGTCGACG AGCACCGCCC GGTCCCGCTC TGGCAGCACA TGCTCGCCGG CAACCGCCTG
TACGACCTGT TCGTGGCGGA CGAGGACGGC CGGCGGCCGC AGGTCAACCC CCACCTGATG
CGGATCGCCA AGGACGAGGA ACGCCAGTCG TACGGCAGGG GCCGCCGCGG CTACTCCCGC
CCGCGCAGGG CCGCCCCGCC CGACCGGGCG TCGGCCATCG AGCGCCTCGA CGCCGACGGC
CTGCTCCCGG CGATCACCTT CATCTTCTCC CGCGCCGGCT GCGACGCGGC CGTCATACAG
TGCCTGCACG CCGGCATCCG GCTCACCACC GACGCCGAAC GCCACCAGAT CCGGCAGATC
GTCGACGAGC GCACCGCGCA CCTGCCCGAC GAGGACCTGG CCGTGCTGGG CTACCTCGAA
TGGCGCGACG GCCTTGAGCG CGGCCTCGCC GCCCACCACG CGGGCATGCT CCCGGCCTTC
AAGGAGGTCG TCGAGGAACT GTTCACCCGC AACCTGGTCA AGGCCGTGTT CGCCACCGAG
ACCCTGGCGC TGGGCATCAA CATGCCCGCC CGCTCCGTGG TGATCGAGAA GCTCGACAAG
TGGAACGGCG AGACCCACGC CGACCTCACG CCCGGCGAAT ACACCCAGCT CACCGGCCGG
GCCGGGCGGC GGGGCATCGA CGTGGAGGGC CACGCGGTCG TCCAGTGGCA GCCGGGCATG
GACCCGCTGC AGGTCGCGGG ACTGGCCAGC ACCCGCACCT ACCCGCTGCG CTCCAGCTTC
CGCCCCTCCT ACAACATGGC GGTCAACCTG GTCGGCCAGG TGGGCAGGGA GCGCGCCAGG
ACCCTCCTGG AGTCCTCTTT CGCTCAGTTC CAGGCCGACC GGGCCGTGGT GGGCATCGCC
AAGCAGGTGC GCCGCGCCGA GGAGGCCCTG GAGGGCTACC GCGAGGCGAT GACCTGCCAC
CTGGGCGACT TCGAGGAGTA CGCCGCGATG CGCAGGGCGC TGTCCGACCG GGAGGCCGAG
CTGTCACGCC AGCGCGGCGC GGCCCGCAGG GCGCAGGCGC TGCGCTCGCT GGAGGCGCTC
AAGCCGGGTG ACATCATCCG TGTCCCGGGC GGGCGCCGCG CCGGTCTGGC GGTCGTCCTC
GACCCCGGTC TCAACTCCCG GGGAGAGGGC CCCGCACCGC TGGTGCTGAC CATCGGCAAG
CAGGTCAAGA AGCTGTCGCC GGCCGACTTC CCGGTCCCGG TGGAGCCGGT CGAGCATCTG
CGCATCCCGA AGAACTTCAA CGCGCGCTCG CCGAAGGAGC GGGCCAACCT GGTCGCCTCC
GTCCACGCCA AGATCGGCGA CCGCGACTTC GGCAAGCCGG CCAGGGCACG CGACCACGCG
GCCGAGGACG ACGAGATCAA CCGCCTGCGC AAGGCGATCC GCCAGCACCC CTGCCACGGC
TGTGACGAGC GCGAGGACCA CGCCCGCTGG GCCGAGCGCT ACTACAAGCT GCTGCGCGAG
ACCGAGGGAC TGCGCCGCCG GGTCGAGGGC CGCTCCCACG TCATCGCCCG CACCTTCGAC
AAGGTCTGCG GAGTGCTCGA CCAGCTCGGC TACCTGGAGG GCGAGAGCGT CACCGCCGAG
GGGCGCCGCC TGGCCCAGCT CTACACCGAG CTGGACCTGC TCACCGCCGA GTGCCTGCGC
GCCGGGCTCT GGGAGGAGCT GGACCCGGCC GAGCTGGCCG CCGTCGTGTC CTCGCTGGTC
TTCGAGTCCA GGCAGGCCGA CGACGCCCGC CAGCCGAGGA TCCCGGCGGG CGGGGTGCAG
AAGGCGCTGG GGGACATGGT CAGGCTCTGG GGGGAGCTGG AGTCGATCGA GGGCGACCAC
GGACTGTCCT TCATCAGGGA GCCCGACTTC GGGTTCGCCT GGGCGGCCTT CCGCTGGGCC
AAGGGCCAGA ACCTGGACGC CGTGCTGAGG GACGGGGTCA ACGGGGCCGA GCTGGCCGCC
GGCGACTTCG TCCGCTGGAT CAAGCAGCTG CTCGACCTGC TCGGCCAGAT CTCCGACGCC
GCTCCCAAGA GCAGCAAGGT CAAGCAGAAC ACCGGCAAGG CGATGGACGC GCTCCGGCGC
GGGGTGGTGG CCTACTCCTC CCTCACCTGA
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| Protein sequence | MTTPAERYAA FRQSQADSGP ALTSFRGLYD FDLDDFQLDA CRALEAGDGV LVAAPTGSGK
TVVGEFAVHL ALEQGRKCFY TTPIKALSNQ KYNDLVRRYG AAGVGLLTGD NSINGDAPIV
IMTTEVLRNM LYAGSGTLAG LGFVVMDEVH YLADRFRGAV WEEVIIHLPE SVRLVALSAT
VSNAEEFGEW MGEVRGDTSV IVDEHRPVPL WQHMLAGNRL YDLFVADEDG RRPQVNPHLM
RIAKDEERQS YGRGRRGYSR PRRAAPPDRA SAIERLDADG LLPAITFIFS RAGCDAAVIQ
CLHAGIRLTT DAERHQIRQI VDERTAHLPD EDLAVLGYLE WRDGLERGLA AHHAGMLPAF
KEVVEELFTR NLVKAVFATE TLALGINMPA RSVVIEKLDK WNGETHADLT PGEYTQLTGR
AGRRGIDVEG HAVVQWQPGM DPLQVAGLAS TRTYPLRSSF RPSYNMAVNL VGQVGRERAR
TLLESSFAQF QADRAVVGIA KQVRRAEEAL EGYREAMTCH LGDFEEYAAM RRALSDREAE
LSRQRGAARR AQALRSLEAL KPGDIIRVPG GRRAGLAVVL DPGLNSRGEG PAPLVLTIGK
QVKKLSPADF PVPVEPVEHL RIPKNFNARS PKERANLVAS VHAKIGDRDF GKPARARDHA
AEDDEINRLR KAIRQHPCHG CDEREDHARW AERYYKLLRE TEGLRRRVEG RSHVIARTFD
KVCGVLDQLG YLEGESVTAE GRRLAQLYTE LDLLTAECLR AGLWEELDPA ELAAVVSSLV
FESRQADDAR QPRIPAGGVQ KALGDMVRLW GELESIEGDH GLSFIREPDF GFAWAAFRWA
KGQNLDAVLR DGVNGAELAA GDFVRWIKQL LDLLGQISDA APKSSKVKQN TGKAMDALRR
GVVAYSSLT
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