Gene Sros_5805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5805 
Symbol 
ID8669099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6369031 
End bp6370155 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content73% 
IMG OID 
Productpeptidase, S1E (streptogrisin A) subfamily 
Protein accessionYP_003341294 
Protein GI271967098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.202302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.468539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGTC GAGGCCCCCT CCTGGCCGGA GCCGCCACAG TGGCCCTGTA CCTGGCCGCC 
AGCGTGACAC CCGCCACCGC AGCACCCGCC CCCCTCTCCC CCAAGCCGCC GTCGCCCGTG
ATCGTCGACG CCCTCCAGCG CGACCTCGGC CTCACCGCCG AGCAGGCCGT GGCGCGGCTG
GCCAACGAGG AACGCGCCAT GGCCACGGAG TCCACCCTGA GCGGCACGCT CGGCGGCAAG
TACGCCGGCG CCTGGCTCAA CGGCGACGCC TCCCAGCTCC TCGTCGGCAC CAGCGACGCC
ACCACGGCCG ACGCCATCAG GGCCCAGGGC GCCCAGCCCG TGATCGTCAG CCGGACCCTG
GAGCAGCTCA ACGCGGTCAA GGACCGGCTC GACCAGGCTC CGGCCCGGGC CAAGGCCGGC
GCGTCCCTGT GGTACGTCGA CCTGCCCACC AACAGCGTCG TCGTCCAGGC CGCCCAGCAG
GCCGGAGGCG AAGCCCTCAT CGCCGCCGCC GGCGTCGACA AGGACGCGGT CCGGGTGGCG
GTGACCGCCG AACGGCCCCA GCCCTTCATC GACATCATCG GCGGCAACCC CTTCTACATC
GGCTCCAGCC GCTGCAGCAT CGGCTTCTCC GTGACCAAGG GGAGCACGCC GGGCTTCGTC
ACCGCGGGCC ACTGCGGCAG GAGGGGCGCC ACGACCACCA ACCCGACCGG CACCTTCCAG
GGCTCCTCCT TCCCCGGTAA CGACTACGCG TGGGTGGCCG CCCCCGGCAA CACCCCCAGG
CCGTGGGTGA AGGGGTCCGG CGGCGCCAAC GTCATCGTCC GCGGGTCCAC GCAGGCCGTG
GTCGGCTCCT CCATCTGCCG CTCCGGCTCC ACCACCGGCT GGCGCTGCGG CACCATCCAG
CAGCACAACG CCAGCGTGAC CTACCCGCAG GGCACGGTCA GCGGCCTGAC CCGCACCAGC
GCGTGCGCCC AGCCGGGCGA CTCCGGCGGG TCGTTCATCT CCGGCAGCCA GGCCCAGGGC
ACGACCTCGG GCGGCTCCGG CAACTGCACC TCGGGCGGCA CGACCTACCA CCAGCCGGTC
AACGAGCCCC TGTCCGTCTA CGGGCTGACC CTGACCGTCG GCTGA
 
Protein sequence
MFSRGPLLAG AATVALYLAA SVTPATAAPA PLSPKPPSPV IVDALQRDLG LTAEQAVARL 
ANEERAMATE STLSGTLGGK YAGAWLNGDA SQLLVGTSDA TTADAIRAQG AQPVIVSRTL
EQLNAVKDRL DQAPARAKAG ASLWYVDLPT NSVVVQAAQQ AGGEALIAAA GVDKDAVRVA
VTAERPQPFI DIIGGNPFYI GSSRCSIGFS VTKGSTPGFV TAGHCGRRGA TTTNPTGTFQ
GSSFPGNDYA WVAAPGNTPR PWVKGSGGAN VIVRGSTQAV VGSSICRSGS TTGWRCGTIQ
QHNASVTYPQ GTVSGLTRTS ACAQPGDSGG SFISGSQAQG TTSGGSGNCT SGGTTYHQPV
NEPLSVYGLT LTVG