Gene Sros_5797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5797 
Symbol 
ID8669091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6357643 
End bp6359826 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content70% 
IMG OID 
ProductZinc metalloprotease (elastase)-like protein 
Protein accessionYP_003341286 
Protein GI271967090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.10062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCT CTGTCGCGTT TGCGCTAGTG GCCACGGCGA CAAGCATGGT CGTGGCACTG 
TCCACCGCAT CGGCGGGAGC CGCCGGACTG ACCGTCCTAG CCCCGTCGAT CGCCCCTCCC
GACTCCCCCG CCCAGGCGGC CGACCGCCTG GTCGAAGCCG AGCCCGCCGT CCTGCAGGCC
TCGGCCAGGG ACCAGTTCCT GCGCCGCAGC GCCATGTCGG GCAAGGGGGG ACTCAACTAC
GTCTCCTACA CCCGTACCTA CGCCGGCCTG CCCGTCTACG GCGGCGACTT CGTCGTCGTC
ACCAACTCCA CCGGTGGCGT GCTGAGCACG TCGGTCGCCC AGACCGAGGC TCTGAACGTC
GGGACCACCC CGAAGGTGGA GGCACAGAAG GCCGCGGAGA TCGCCAAGGC CGAGATCACC
GACGCCGCCG AGGTCTCCAC GCCCAAGCTG TCGGTGATGG CCCAGGGCTC CGGGCGGCTC
GCCTACGAGG TGGTCGTCAG CGGCACGAAC AAGGGCCGCG AGAGCAAGAT GCACGTCTTC
GTCGACGCGC TGACCGGCGA GGTCGCCGAG AAGTCGGACG AGGTCATGGC CGGTCAGGGG
ACGGGCTACT ACAACGGCCC GGTCACCATC GGCACCACGT CCGGCTCGCC GTACTCCATG
ACCGACCCGA CCCGCACCGG CGTCCGCTGC GGCGGCCAGA ACGGCAGCGC CTACACCGGC
CCCGACGACA CCTGGGGCAA CGGCTCGGGC ACCGACCTGG AGACCGCCTG CGTGGACGCC
CTCCACGCCG CGGGCAAGGA ATGGGACATG CTGAGCACCT GGCTCGGCCG CAACGGGTTC
AACGGCACCG GCGGCGGCTT CCCCGCCAGG GTCGGCCTGT CCGACGTCAA CGCCTACTGG
AACGGCAGCT ACACCAACTT CGGCCGCTCC CAGGACAGCC AGCGCCAGGC GACCCCGATG
GACGTGGTGG CCCACGAGTA CGGCCACGCC ATCTTCCAGA CCACGCCCGG CGGCTCGACC
GGCAGCAACG AGAAGGGCGG GCTCAACGAG TCCACCGGTG ACATCTTCGG CGCGCTGACC
GAGTACTACG CCAACGAGCC GGCCCAGTAC GACCCGCCGG ACTTCAGCGT GGGCGAGGAG
GTCAACCTGG TCGGCAGCGG GCCGATCCGC TACATGCACA AGCCGTCGCA GATCTCCGGC
CACCCCGACT GCTACTCCGC CTCGGTGCCG AACCTGGAGG TGCACGCGGG GGCGGGCGTC
CAGAACCACT GGTTCTACCT GCTCGCCCAG GGCACGAACC CGACCGACGG CCAGCCGGTC
AGCCCGACCT GCAACGGCTC CACCCTCACC GGCCTCGGCA TCCAGAAGGC CGGCCAGATC
TTCATGGGCG CGCTGCTGCG CAAGACCACG ACCTGGACCC ACTCGCTCGT CCGCAAGGCC
TCGCTGGAGG CGGCGATCCA GCTGTTCCCC GGCTCCTGCA CCGAGTTCAA CGCGACCAAG
GCGGCCTGGA CCGCGGTCAG CGTCCCCGCC GCTTCGAACG AGCCCACCGC GTGCTCGACG
GGCCCCGACT TCTCCCTGAC GCTCAACCCG ACGTCGGCGA GTGTGCAGCC CGGCCAGCAG
GCGACCACGA CGGTCGGCAC GCAGACGACC TCGGGCACCG CGCAGAGCGT GACGTTCTCG
GCGTCCGGCC TGCCCTCGGG CGCGACCGCC TCCTTCACCC CGCCGTCGGT GACCTCCGGC
GCCTCCTCCA CCCTGGCGAT CACGGTCCCG GCGGGCACCG CGACCGGCAC GTACAACGTG
ATCGTCACAG GTGACGGGAC CAGCGTCGAC AGGACGGCCA CGTTCACCCT GAACGTCGGC
GGCACCGGTC CGTGCGCCGG CAGGCAGCAC ACCTACACCG GCACCCTCTC CTCGGGATCC
AGTGTCTACC AGCCGGGCAC GGCCGGCTTC CAGACCACCA CGTCGGGAAC GCACGCGGCC
TGCCTGGACG GCCCGAACGG CACCGACTTC GACCTGTACC TGCAGAAGCG GAACAGCTTG
GGCACCTGGT CGACCGTGGC CAGCGGCACC TCGGCCAACC CGGATGAGTC CTTCAGCTAC
AACGGCACCG CCGGCTTCTA CCGCTACCGC GTCTACGCCT ACAGCGGCAG CGGCACCTAC
ACCCTGGGCT ACAACGCCCC GTAA
 
Protein sequence
MKRSVAFALV ATATSMVVAL STASAGAAGL TVLAPSIAPP DSPAQAADRL VEAEPAVLQA 
SARDQFLRRS AMSGKGGLNY VSYTRTYAGL PVYGGDFVVV TNSTGGVLST SVAQTEALNV
GTTPKVEAQK AAEIAKAEIT DAAEVSTPKL SVMAQGSGRL AYEVVVSGTN KGRESKMHVF
VDALTGEVAE KSDEVMAGQG TGYYNGPVTI GTTSGSPYSM TDPTRTGVRC GGQNGSAYTG
PDDTWGNGSG TDLETACVDA LHAAGKEWDM LSTWLGRNGF NGTGGGFPAR VGLSDVNAYW
NGSYTNFGRS QDSQRQATPM DVVAHEYGHA IFQTTPGGST GSNEKGGLNE STGDIFGALT
EYYANEPAQY DPPDFSVGEE VNLVGSGPIR YMHKPSQISG HPDCYSASVP NLEVHAGAGV
QNHWFYLLAQ GTNPTDGQPV SPTCNGSTLT GLGIQKAGQI FMGALLRKTT TWTHSLVRKA
SLEAAIQLFP GSCTEFNATK AAWTAVSVPA ASNEPTACST GPDFSLTLNP TSASVQPGQQ
ATTTVGTQTT SGTAQSVTFS ASGLPSGATA SFTPPSVTSG ASSTLAITVP AGTATGTYNV
IVTGDGTSVD RTATFTLNVG GTGPCAGRQH TYTGTLSSGS SVYQPGTAGF QTTTSGTHAA
CLDGPNGTDF DLYLQKRNSL GTWSTVASGT SANPDESFSY NGTAGFYRYR VYAYSGSGTY
TLGYNAP