| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5795 |
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| Symbol | |
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| ID | 8669089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 6353958 |
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| End bp | 6355565 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | membrane protein putative virulence factor-like protein |
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| Protein accession | YP_003341284 |
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| Protein GI | 271967088 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.401085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0760131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC AGCCTCGTCT CATCCGAACA GGCCGGAGGA TGGCGCTGGC CACCCTCACC
TCCCGGGTGA CCGGTTTCCT CCGGACGCTG GCGCTCGTGG TCGCGCTGGG CCTCGGAACC
CGGCTGCTCG ACGCCTACAC GGTGGCGAAC ACGACCCCGA ACACGATCTA TGAGCTGGTG
CTCGGCGGCA CGCTGGCCGG CGTCATGATC CCCCTGCTGA TCCGGGCGGC CGCGGAACCC
GGCGTCGACA GCGACCTCCA CGCCCAGCGG CTGCTGTCGG CGATCGTCTA CGTCCTCGGC
GCCACCGTCG TCCTCACGGT GGCGGCGGCC CCCTGGATCG TGGACCTCTA CGCGCCGGGG
TTCAGCCCGG AACAGCGGGA CCTGGCGATC CTTCTCACCA GGTACTTCCT GCCGCAGATC
CTGCTCTACG GCCTCGGCAC CGGCATGGCG GCCGTTCTCA ACGCGCGGGG CGACCTGGCC
ACGCCGATGT GGGCGCCGGT CGCCAACAAC GTCGTGGTCA TCGCCACCGC GCTCGGCTAC
GTCCTGCTCG GAGGCGGAGG AGAGCTCGCC GCGCTGACCC CGGGACAGTC ACTGCTGCTG
TCGCTCGGCA CCACGGCCGG AGTCGCCGTC CAGACGCTCG TGCTGGCGGC GGCGCTCCGG
CGGAACGGGT TCCCCCTGCG GCTACGGCTG GACCCGCGAG GCGCCGGGCT CCGCCGGACC
GCCCGCATGG CCGGCTGGAC CCTGCTCTAC GTGATCGCGG CCCAGGCCGT CTTCACCGTC
GGGACCCGGC TGGCGTCCGG TGCCGGCCCG GGTCCGGTGG CCGTCTACCA GAACGCCTAC
ACGCTCTTCC AGCTCCCCTA CGCCGTCATC GCGGTGTCCG TCATCACGGG GGTGCTGCCG
AGGATGAGCG CGGCCGCCGG CGGGCGGGAC CTCGCCAGGA TCACCGCCGA CCTCTCCCAC
GGTCTGCGGC TCACCGCGGT CGTGCTCATG CCCGTCGCCG CCGCGCTCGT CGTGCTCGGG
CCGCAGATCA CCACGCTGCT GTTCGCTCAC GGCAACGCCT CGGCCGACGC GGCCCGCCTC
ACCGGTTCGG TCCTGGCGGC CTTCGGTTTC GCGCTGGTCC CCTTCGCCGG CTACCAGATC
ATGCTGCGCG TCTTCTACGC CCTCCAGGAC ACCCGGACCC CCGCTCTCAT TCACGTCGGC
GTCGCCGTGG TCGCGATCGC CTCGTCGGTC GCGCTCTCCT CCGCGCTGCC CGCCCGGGAC
CTCCTCGTCG GCCTGGCCGC CTGCTACGCG GCCGCCCACG CGGTCGGGTT CGCCGCGGCG
GCGGCCGTTC TGCGCCACCG GCTGGGCCGG ATCGACGGGC ACAGGCTGCT CAGGAGCCAC
TCCCGGATGC TCGCCGCGTC CCTCGCCGCC GGCGGCGCCG GGGCGCTCGT CGCCTACGCC
CTGCGCCACG GAGGCGTGGC CGGTGCCGGG TGGTCCGGAT CCCTGGTGAC CGTGCTCGCC
GTCTCGGCGG TCGGCGCCGG CCTCTACGCC CTCGTCGCCC ACCTGCTGCG CGTCCCCGAG
CTGCGCACTC TGGTGAGGGC GCTGCGGCCG GGCACGGCCG CCGGTTGA
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| Protein sequence | MTEQPRLIRT GRRMALATLT SRVTGFLRTL ALVVALGLGT RLLDAYTVAN TTPNTIYELV
LGGTLAGVMI PLLIRAAAEP GVDSDLHAQR LLSAIVYVLG ATVVLTVAAA PWIVDLYAPG
FSPEQRDLAI LLTRYFLPQI LLYGLGTGMA AVLNARGDLA TPMWAPVANN VVVIATALGY
VLLGGGGELA ALTPGQSLLL SLGTTAGVAV QTLVLAAALR RNGFPLRLRL DPRGAGLRRT
ARMAGWTLLY VIAAQAVFTV GTRLASGAGP GPVAVYQNAY TLFQLPYAVI AVSVITGVLP
RMSAAAGGRD LARITADLSH GLRLTAVVLM PVAAALVVLG PQITTLLFAH GNASADAARL
TGSVLAAFGF ALVPFAGYQI MLRVFYALQD TRTPALIHVG VAVVAIASSV ALSSALPARD
LLVGLAACYA AAHAVGFAAA AAVLRHRLGR IDGHRLLRSH SRMLAASLAA GGAGALVAYA
LRHGGVAGAG WSGSLVTVLA VSAVGAGLYA LVAHLLRVPE LRTLVRALRP GTAAG
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